RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CTLA4P16410 223 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF823P16415 610 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 GNG3P63215 75 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 RPEL1Q2QD12 228 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 DOK3Q7L591 496 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 OR51T1Q8NGJ9 327 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 NEU4Q8WWR8 484 aaPredicted RBP10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 PTH2Q96A98 100 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 SH2D2AQ9NP31 389 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 WDFY3Q8IZQ1 3526 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 FOXI3A8MTJ6 420 aaPredicted RBP10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 M0R2Z0 102 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 PHF1O43189 567 aaPredicted RBP10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 TMEM50AO95807 157 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 P04436 131 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 LIFP15018 202 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 RPS27P42677 84 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 TCL1AP56279 114 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 RPP25LQ8N5L8 163 aaKnown RBP10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 NECAP2Q9NVZ3 263 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 ANXA10Q9UJ72 324 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 KNTC1P50748 2209 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 CACNA1HO95180 2353 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 KBTBD11-OT1A0A1B0GTJ5 212 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 CA1P00915 261 aaPredicted RBP10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 COX8AP10176 69 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 NPPCP23582 126 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 SRIP30626 198 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 KIR2DL2P43627 348 aaPredicted RBP10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 KLRD1Q13241 179 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 KIR3DS1Q14943 382 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 TIMM23BQ5SRD1 257 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 FAM162BQ5T6X4 162 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 C2orf91Q6ZV80 131 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 OR8B12Q8NGG6 310 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 KCNIP2Q9NS61 270 aa10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 COA3Q9Y2R0 106 aaPredicted RBP10.57□□□□□ -0.72
RTFDC1-207ENST00000477573 DHHO43323 396 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 PDCD1Q15116 288 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 HES3Q5TGS1 186 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 DHRS13Q6UX07 377 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 SUMF1Q8NBK3 374 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 OXGR1Q96P68 337 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 RAB40CQ96S21 281 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 VGLL1Q99990 258 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 TPPP3Q9BW30 176 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 TMEM222Q9H0R3 208 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 GCM1Q9NP62 436 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 EML6Q6ZMW3 1958 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 A0A1W2PNR3 127 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 SYNGR1O43759 233 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 CHST1O43916 411 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 PAGE4O60829 102 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 IGHG1P01857 330 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 PAX9P55771 341 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 HBG1P69891 147 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 HBG2P69892 147 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 CXorf66Q5JRM2 361 aaPredicted RBP10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 ABHD17BQ5VST6 288 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF841Q6ZN19 808 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF525Q8N782 197 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 ZBTB34Q8NCN2 500 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 OR52N5Q8NH56 324 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 APOBEC3DQ96AK3 386 aaPredicted RBP10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 PROK2Q9HC23 129 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 MED29Q9NX70 200 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 LY96Q9Y6Y9 160 aa10.56□□□□□ -0.72
RTFDC1-207ENST00000477573 SDK2Q58EX2 2172 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 A0A087WX48 190 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 PIGBOS1A0A0B4J2F0 54 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 BMPR1BO00238 502 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 APOA2P02652 100 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 CLRN1P58418 232 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 GNB1P62873 340 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 CX3CL1P78423 397 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 TRIP6Q15654 476 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 ZNF611Q8N823 705 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 OR4A16Q8NH70 328 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 OR1F12Q8NHA8 337 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 TMEM54Q969K7 222 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 PIGTQ969N2 578 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 NGBQ9NPG2 151 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 EMC9Q9Y3B6 208 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 NCKAP5O14513 1909 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 AHCTF1Q8WYP5 2266 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 FREM3P0C091 2139 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 M0QXV9 152 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 Q0VFX4 171 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 TSPO2Q5TGU0 170 aa10.55□□□□□ -0.72
RTFDC1-207ENST00000477573 MMD2Q8IY49 270 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms