RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, human

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DMA-208	ENST00000477541	SSTR5	P35346	364 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	IER3	P46695	156 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	COMP	P49747	757 aa	Predicted RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	HCFC1	P51610	2035 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TAS2R45	P59539	299 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	RPS16	P62249	146 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	POU2AF1	Q16633	256 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TIGIT	Q495A1	244 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MORN2	Q502X0	79 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	KRTCAP3	Q53RY4	240 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SPINK9	Q5DT21	86 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SLC24A4	Q8NFF2	622 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	NEUROG1	Q92886	237 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	COMMD5	Q9GZQ3	224 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TMEM140	Q9NV12	185 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TECR	Q9NZ01	308 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MRPL27	Q9P0M9	148 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ZFP30	Q9Y2G7	519 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	NBEA	Q8NFP9	2946 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	DSP	P15924	2871 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MAST4	O15021	2626 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	HELT	A6NFD8	242 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541		M0R1X1	148 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	AQP7	O14520	342 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MGST3	O14880	152 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	AMY1A	P04745	511 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ZNF883	P0CG24	379 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CD46	P15529	392 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SPINK2	P20155	84 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CTRL	P40313	264 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	HSPE1	P61604	102 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SUMO1	P63165	101 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	LPAL2	Q16609	132 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TMEM30B	Q3MIR4	351 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	VN1R17P	Q8TDU5	208 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	DDB2	Q92466	427 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	HES7	Q9BYE0	225 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TMEM14B	Q9NUH8	114 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	GNG12	Q9UBI6	72 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	IL17B	Q9UHF5	180 aa		11.18	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TRGV5	A0A0B4J1U4	118 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541		A0A1W2PRE2	83 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	DIRC3	C9JPN6	131 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	WNT9B	O14905	357 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	IGKV3-15	P01624	115 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CELA3B	P08861	270 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CFHR2	P36980	270 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	THBS3	P49746	956 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ALKBH6	Q3KRA9	238 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541		Q6ZR03	302 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TMEM136	Q6ZRR5	245 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	WIPF2	Q8TF74	440 aa	Predicted RBP	11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	GNB4	Q9HAV0	340 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	NAT8B	Q9UHF3	227 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ZNF257	Q9Y2Q1	563 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	PAM16	Q9Y3D7	125 aa		11.17	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SMIM27	A0A1W2PRY6	76 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	IGHV1-2	P23083	117 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	HOXC12	P31275	282 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CDKN1A	P38936	164 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MPV17	P39210	176 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	PMCHL1	Q16048	86 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CENPW	Q5EE01	88 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MBNL2	Q5VZF2	373 aa	Known RBP	11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541		Q6ZT83	130 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	GCSAM	Q8N6F7	178 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541		Q8TCH9	128 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	C1orf159	Q96HA4	380 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	FER1L6-AS2	Q96M78	137 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	MRPL32	Q9BYC8	188 aa	Known RBP	11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	FBXL7	Q9UJT9	491 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	PRND	Q9UKY0	176 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ITPR1	Q14643	2758 aa		11.16	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SLC17A3	O00476	420 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	PROP1	O75360	226 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	ZNF324	O75467	553 aa	Predicted RBP	11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	BMP5	P22003	454 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	PRDX2	P32119	198 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	OR8I2	Q8N0Y5	310 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541		Q8N976	141 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	OR4P4	Q8NGL7	312 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	OR5B3	Q8NH48	314 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	CHRDL1	Q9BU40	450 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	IFI27L2	Q9H2X8	130 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	SEPSECS	Q9HD40	501 aa	Known RBP	11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	NRN1	Q9NPD7	142 aa		11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	TBL2	Q9Y4P3	447 aa	Known RBP	11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	DIDO1	Q9BTC0	2240 aa	Known RBP	11.15	□□□□□ -0.62
HLA-DMA-208	ENST00000477541	IGHV3-43	A0A0B4J1X8	118 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	TIMM8A	O60220	97 aa	Predicted RBP	11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	IGHV3-43D	P0DP04	118 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	PPOX	P50336	477 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	PRRX1	P54821	245 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	MRPS11	P82912	194 aa	Known RBP	11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	FAM162B	Q5T6X4	162 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	TMEM164	Q5U3C3	297 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	ZNF826P	Q6ZT77	177 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	FAM231D	Q6ZW35	169 aa		11.15	□□□□□ -0.63
HLA-DMA-208	ENST00000477541	ST6GALNAC3	Q8NDV1	305 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms