RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SH3BGRL3Q9H299 93 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 FKBP11Q9NYL4 201 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
COL4A6-206ENST00000477085 TNCP24821 2201 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 TRAV20A0A0B4J274 112 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 NMBP08949 121 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 FAM157CP0CG43 387 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 IGHV4-31P0DP07 118 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 EBI3Q14213 229 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 NPBQ8NG41 125 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 ATP5SQ99766 215 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 CACFD1Q9UGQ2 172 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 ITPR2Q14571 2701 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 FBXO24O75426 580 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 PPP1R27Q86WC6 154 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 OR1L8Q8NGR8 309 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 COMMD5Q9GZQ3 224 aa11.54□□□□□ -0.56
COL4A6-206ENST00000477085 AKAP9Q99996 3911 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 NDUFA3O95167 84 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 TGFAP01135 160 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 IFNA10P01566 189 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 SLC38A11Q08AI6 406 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 HSD17B11Q8NBQ5 300 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 WFDC11Q8NEX6 87 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 PLEKHA3Q9HB20 300 aa11.53□□□□□ -0.56
COL4A6-206ENST00000477085 BORCS7-ASMTA0A0B4J1R7 106 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 CA2P00918 260 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 SPP1P10451 314 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 HES1Q14469 280 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 MMDQ15546 238 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 BSXQ3C1V8 233 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 CIARTQ8N365 385 aaPredicted RBP11.52□□□□□ -0.57
COL4A6-206ENST00000477085 OR2T10Q8NGZ9 312 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 CR1P17927 2039 aa11.52□□□□□ -0.57
COL4A6-206ENST00000477085 INS-IGF2F8WCM5 200 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 NBR2O15453 112 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 GATA3P23771 443 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 COMPP49747 757 aaPredicted RBP11.51□□□□□ -0.57
COL4A6-206ENST00000477085 HBG1P69891 147 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 HBG2P69892 147 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 RUNX1Q01196 453 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 ZNF266Q14584 549 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 MMD2Q8IY49 270 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 OR10P1Q8NGE3 313 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 PIFOQ8TCI5 191 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 CXorf58Q96LI9 332 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 SLC25A32Q9H2D1 315 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 LY86O95711 162 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
COL4A6-206ENST00000477085 RAB14P61106 215 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 EIF5AP63241 154 aaKnown RBP11.51□□□□□ -0.57
COL4A6-206ENST00000477085 TNXAQ16473 311 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 ETV3LQ6ZN32 361 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 ENY2Q9NPA8 101 aa11.51□□□□□ -0.57
COL4A6-206ENST00000477085 PRRC2AP48634 2157 aaKnown RBP11.5□□□□□ -0.57
COL4A6-206ENST00000477085 HECTD1Q9ULT8 2610 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 IGLC7A0M8Q6 106 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 FGF16O43320 207 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 DFFBO76075 338 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 OR8U8P0C7N1 319 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 MDKP21741 143 aaPredicted RBP11.5□□□□□ -0.57
COL4A6-206ENST00000477085 NPY1RP25929 384 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 GNB1P62873 340 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 LRRC75BQ2VPJ9 315 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 LILRB2Q8N423 598 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 CITED4Q96RK1 184 aa11.5□□□□□ -0.57
COL4A6-206ENST00000477085 REG1AP05451 166 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 APELAP0DMC3 54 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 AREGP15514 252 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 TMEM11P17152 192 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 MAS1LP35410 378 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 RPP30P78346 268 aaKnown RBP11.49□□□□□ -0.57
COL4A6-206ENST00000477085 C5orf64Q2M2E5 130 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 C19orf35Q6ZS72 473 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 WDR61Q9GZS3 305 aaKnown RBP11.49□□□□□ -0.57
COL4A6-206ENST00000477085 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 PLXNB1O43157 2135 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 FASNP49327 2511 aaKnown RBP11.49□□□□□ -0.57
COL4A6-206ENST00000477085 UBE2L5PA0A1B0GUS4 154 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
COL4A6-206ENST00000477085 SULT1A2P50226 295 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 PLGLAQ15195 96 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 MLANAQ16655 118 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
COL4A6-206ENST00000477085 PINX1Q96BK5 328 aaKnown RBP11.49□□□□□ -0.57
COL4A6-206ENST00000477085 RSG1Q9BU20 258 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms