RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SSX3Q99909 188 aa13.47□□□□□ -0.25
TMEM53-208ENST00000476724 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
TMEM53-208ENST00000476724 FKBP11Q9NYL4 201 aa13.47□□□□□ -0.25
TMEM53-208ENST00000476724 S100A2P29034 98 aa13.46□□□□□ -0.25
TMEM53-208ENST00000476724 GNG10P50151 68 aa13.46□□□□□ -0.25
TMEM53-208ENST00000476724 ADIPOQQ15848 244 aa13.46□□□□□ -0.25
TMEM53-208ENST00000476724 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
TMEM53-208ENST00000476724 GAR1Q9NY12 217 aaKnown RBP13.46□□□□□ -0.25
TMEM53-208ENST00000476724 OR51B2Q9Y5P1 312 aa13.46□□□□□ -0.25
TMEM53-208ENST00000476724 UPK2O00526 184 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 TMPRSS2O15393 492 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 OR4A8P0C604 315 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 TRGC1P0CF51 173 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 SFTPCP11686 197 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 NDUFB7P17568 137 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 CCL8P80075 99 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 GCSAMLQ5JQS6 135 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 ABHD5Q8WTS1 349 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 PATZ1Q9HBE1 687 aaKnown RBP13.46□□□□□ -0.26
TMEM53-208ENST00000476724 SLC35D1Q9NTN3 355 aa13.46□□□□□ -0.26
TMEM53-208ENST00000476724 PPP1R2P9O14990 202 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 CA2P00918 260 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 CT45A6P0DMU7 189 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 CT45A5P0DMU8 189 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 CT45A7P0DMV0 189 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 DEFA4P12838 97 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 CHRNB4P30926 498 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 GALR1P47211 349 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 RPL29P47914 159 aaKnown RBP13.45□□□□□ -0.26
TMEM53-208ENST00000476724 B2MP61769 119 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 MIC13Q5XKP0 118 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 SPNS3Q6ZMD2 512 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 FRZBQ92765 325 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 OR51M1Q9H341 326 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
TMEM53-208ENST00000476724 SLC25A10Q9UBX3 287 aaPredicted RBP13.45□□□□□ -0.26
TMEM53-208ENST00000476724 J3QR06 171 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 MMP23AO75900 390 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 CD99P14209 185 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
TMEM53-208ENST00000476724 PRCDQ00LT1 54 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 ARSJQ5FYB0 599 aaPredicted RBP13.44□□□□□ -0.26
TMEM53-208ENST00000476724 CST9LP1Q5W188 147 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 PLEKHA3Q9HB20 300 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 ROS1P08922 2347 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 TMEM8BA6NDV4 472 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 PHOX2AO14813 284 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 NPPCP23582 126 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 RHOBP62745 196 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 ZNF833PQ6ZTB9 187 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 OSR1Q8TAX0 266 aaPredicted RBP13.44□□□□□ -0.26
TMEM53-208ENST00000476724 LINC01560Q8TB33 94 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 NEUROG1Q92886 237 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 C1orf159Q96HA4 380 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 TMEM204Q9BSN7 226 aa13.44□□□□□ -0.26
TMEM53-208ENST00000476724 PPIAL4EA0A075B759 164 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 PPIAL4DF5H284 164 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 MT-CO2P00403 227 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 ARL14EPLP0DKL9 152 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 PPIAL4FP0DN26 164 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 GNB1P62873 340 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 RPL31P62899 125 aaKnown RBP13.43□□□□□ -0.26
TMEM53-208ENST00000476724 OR5B3Q8NH48 314 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 BTF3L4Q96K17 158 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 PPIAL4AQ9Y536 164 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 PPP5D1E7EU14 171 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 FABP1P07148 127 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 CTAG1AP78358 180 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 DMRTC2Q8IXT2 367 aaPredicted RBP13.43□□□□□ -0.26
TMEM53-208ENST00000476724 ZNF714Q96N38 554 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 SAP30LQ9HAJ7 183 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 DCAF16Q9NXF7 216 aa13.43□□□□□ -0.26
TMEM53-208ENST00000476724 YLPM1P49750 1951 aaKnown RBP13.42□□□□□ -0.26
TMEM53-208ENST00000476724 IFITM10A6NMD0 228 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 TMEM178BH3BS89 294 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 KALRNO60229 2985 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 APOA2P02652 100 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 ATP5G3P48201 142 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 UBE2G2P60604 165 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 EFNB3Q15768 340 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 FBXL19-AS1Q494R0 122 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 KCNIP4Q6PIL6 250 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 STPG3Q8N7X2 389 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 RNASE6Q93091 150 aaKnown RBP13.42□□□□□ -0.26
TMEM53-208ENST00000476724 NGBQ9NPG2 151 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 GSN-AS1Q9NRJ2 163 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 PITPNC1Q9UKF7 332 aa13.42□□□□□ -0.26
TMEM53-208ENST00000476724 SHISA9B4DS77 424 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 GGCTO75223 188 aaKnown RBP13.41□□□□□ -0.26
TMEM53-208ENST00000476724 FAM3BP58499 235 aaPredicted RBP13.41□□□□□ -0.26
TMEM53-208ENST00000476724 PRR20EP86478 221 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 PRR20CP86479 221 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 PRR20DP86480 221 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 PRR20BP86481 221 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 PRR20AP86496 221 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 TMEM144Q7Z5S9 345 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 LINC01551Q86U37 167 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
TMEM53-208ENST00000476724 SSMEM1Q8WWF3 244 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms