RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ANAPC10Q9UM13 185 aa5.24□□□□□ -1.57
HDAC3-207ENST00000475549 TRBV7-1A0A0A6YYK4 115 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 DBX1A6NMT0 343 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 PMP2P02689 132 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 NQO2P16083 231 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 GPR183P32249 361 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 ADMP35318 185 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 EWSR1Q01844 656 aaKnown RBP eCLIP5.23□□□□□ -1.57
HDAC3-207ENST00000475549 FAM106AQ4KMX7 169 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 BTNL8Q6UX41 500 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 TMEM17Q86X19 198 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 CHRDL1Q9BU40 450 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF436Q9C0F3 470 aaPredicted RBP5.23□□□□□ -1.57
HDAC3-207ENST00000475549 DIABLOQ9NR28 239 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 NDUFA4L2Q9NRX3 87 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 NSG2Q9Y328 171 aa5.23□□□□□ -1.57
HDAC3-207ENST00000475549 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
HDAC3-207ENST00000475549 IGHV3-21A0A0B4J1V1 117 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 DHFRP00374 187 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 KRASP01116 189 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 RLN1P04808 185 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 SERPINE2P07093 398 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 FGF2P09038 288 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 OR13C7P0DN81 318 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 NAT1P18440 290 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 F2RP25116 425 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 G6PCP35575 357 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 LPAR6P43657 344 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 KCTD21Q4G0X4 260 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 AADACL3Q5VUY0 350 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 PLET1Q6UQ28 207 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 GDPD1Q8N9F7 314 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 DMBX1Q8NFW5 382 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 OR52B4Q8NGK2 314 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 CD300LFQ8TDQ1 290 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 VN1R17PQ8TDU5 208 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 SCARB1Q8WTV0 552 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 MOB3AQ96BX8 217 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 DGCR14Q96DF8 476 aaKnown RBP5.22□□□□□ -1.57
HDAC3-207ENST00000475549 YIPF6Q96EC8 236 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 S100A16Q96FQ6 103 aaKnown RBP5.22□□□□□ -1.57
HDAC3-207ENST00000475549 CXorf58Q96LI9 332 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 SRSF8Q9BRL6 282 aaKnown RBP5.22□□□□□ -1.57
HDAC3-207ENST00000475549 AIFM2Q9BRQ8 373 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 ZNF2Q9BSG1 426 aaPredicted RBP5.22□□□□□ -1.57
HDAC3-207ENST00000475549 QTRT1Q9BXR0 403 aaKnown RBP5.22□□□□□ -1.57
HDAC3-207ENST00000475549 COMMD5Q9GZQ3 224 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 Q9H521 79 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 C5orf66Q9H5L9 145 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 EHFQ9NZC4 300 aa5.22□□□□□ -1.57
HDAC3-207ENST00000475549 MRPL27Q9P0M9 148 aaKnown RBP5.22□□□□□ -1.57
HDAC3-207ENST00000475549 IGHV3OR16-8A0A075B7F1 116 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TRAV25A0A0B4J276 109 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 OR2T8A6NH00 312 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 MARCH11A6NNE9 402 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 K7EIM0 57 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TGOLN2O43493 480 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TMEM127O75204 238 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 IGKV1-39P01597 117 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 IGKV1D-39P04432 117 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 CTSGP08311 255 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TRAPPC2P0DI81 140 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TRAPPC2BP0DI82 140 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 HLA-DMAP28067 261 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 CBX5P45973 191 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TAS2R20P59543 309 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 LSM3P62310 102 aaKnown RBP5.21□□□□□ -1.58
HDAC3-207ENST00000475549 CATR1Q13166 79 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 SLC16A13Q7RTY0 426 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 CADM3Q8N126 398 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 SAMD12Q8N8I0 201 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 TMEM190Q8WZ59 177 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 MARC2Q969Z3 335 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 GGTLC1Q9BX51 225 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 FXYD6Q9H0Q3 95 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 UBQLN2Q9UHD9 624 aa5.21□□□□□ -1.58
HDAC3-207ENST00000475549 LOC102724200A0A096LPH7 203 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-207ENST00000475549 I3L2K1 104 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 TSPAN4O14817 238 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 EIF4EP06730 217 aaKnown RBP5.2□□□□□ -1.58
HDAC3-207ENST00000475549 HRH1P35367 487 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 ELLP55199 621 aaPredicted RBP5.2□□□□□ -1.58
HDAC3-207ENST00000475549 ODF3L2Q3SX64 289 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 UBE2NLQ5JXB2 153 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 TMEM69Q5SWH9 247 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 SLC25A24Q6NUK1 477 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 RBPMS2Q6ZRY4 209 aaKnown RBP5.2□□□□□ -1.58
HDAC3-207ENST00000475549 CROCCP3Q8IVE0 287 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 OR2C3Q8N628 320 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 OR1L6Q8NGR2 347 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 OR1L8Q8NGR8 309 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 IL17DQ8TAD2 202 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 GPX8Q8TED1 209 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 SLC25A46Q96AG3 418 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 SEC22AQ96IW7 307 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 IFT46Q9NQC8 304 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 TMEM14BQ9NUH8 114 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 C21orf62Q9NYP8 219 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 COMMD9Q9P000 198 aa5.2□□□□□ -1.58
HDAC3-207ENST00000475549 THYN1Q9P016 225 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms