RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 LPAR6P43657 344 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 CSN1S1P47710 185 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 GABRA4P48169 554 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 FOXA1P55317 472 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 TAS2R30P59541 319 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 RPL30P62888 115 aaKnown RBP2.84□□□□□ -1.95
SMC5-203ENST00000475540 ZNF322Q6U7Q0 402 aaPredicted RBP2.84□□□□□ -1.95
SMC5-203ENST00000475540 SPATA12Q7Z6I5 190 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 CNEP1R1Q8N9A8 125 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 OR13C4Q8NGS5 318 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 SLC7A6Q92536 515 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 TOMM6Q96B49 74 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 TMEM70Q9BUB7 260 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 SH3BGRL3Q9H299 93 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 C11orf68Q9H3H3 251 aaKnown RBP2.84□□□□□ -1.95
SMC5-203ENST00000475540 C8orf4Q9NR00 106 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 SS18L2Q9UHA2 77 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 PRNDQ9UKY0 176 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 SLC35A3Q9Y2D2 325 aa2.84□□□□□ -1.95
SMC5-203ENST00000475540 ABCC12Q96J65 1359 aa2.84□□□□□ -1.96
SMC5-203ENST00000475540 NUP160Q12769 1436 aa2.84□□□□□ -1.96
SMC5-203ENST00000475540 THADAQ6YHU6 1953 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 GGTLC3B5MD39 225 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 TSTD3H0UI37 97 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 AIPO00170 330 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 PFDN1O60925 122 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 NDUFC2O95298 119 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 IFNA10P01566 189 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 IGHV1-69P01742 117 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 SERPINB10P48595 397 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 RBM11P57052 281 aaKnown RBP2.83□□□□□ -1.96
SMC5-203ENST00000475540 RWDD2BP57060 319 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 AP1S1P61966 158 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 RPS11P62280 158 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMC5-203ENST00000475540 RHOBP62745 196 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 C12orf45Q8N5I9 185 aaPredicted RBP2.83□□□□□ -1.96
SMC5-203ENST00000475540 EIF4E3Q8N5X7 224 aaKnown RBP2.83□□□□□ -1.96
SMC5-203ENST00000475540 PACRGLQ8N7B6 248 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 C1orf64Q8NEQ6 169 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 OR10P1Q8NGE3 313 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 DUSP21Q9H596 190 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 BATF3Q9NR55 127 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 ASF1BQ9NVP2 202 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 TVP23BQ9NYZ1 205 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 MCTS1Q9ULC4 181 aaKnown RBP2.83□□□□□ -1.96
SMC5-203ENST00000475540 FUT9Q9Y231 359 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 NDUFAF1Q9Y375 327 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 TONSLQ96HA7 1378 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 SPATA31E1Q6ZUB1 1445 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 DENND4BO75064 1496 aaPredicted RBP2.83□□□□□ -1.96
SMC5-203ENST00000475540 NEO1Q92859 1461 aa2.83□□□□□ -1.96
SMC5-203ENST00000475540 DOCK5Q9H7D0 1870 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
SMC5-203ENST00000475540 IGHV3-73A0A0B4J1V6 119 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 A0A1B0GU33 70 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 LOC105371267A0A1B0GV96 52 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 TMEM269A0A1B0GVZ9 245 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 VPS37CA5D8V6 355 aaPredicted RBP2.82□□□□□ -1.96
SMC5-203ENST00000475540 H7C1C5 153 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 MFSD11O43934 449 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 NPYP01303 97 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 IFNA7P01567 189 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BOP23527 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BBP33778 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 FXYD7P58549 80 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BDP58876 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 RAB4BP61018 213 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 NCALDP61601 193 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 LCN6P62502 163 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BCP62807 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 CCL20P78556 96 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 AKR1C1Q04828 323 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 BAMBIQ13145 260 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HTR4Q13639 388 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST2H2BEQ16778 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.82□□□□□ -1.96
SMC5-203ENST00000475540 RPL22L1Q6P5R6 122 aaKnown RBP2.82□□□□□ -1.96
SMC5-203ENST00000475540 TMEM136Q6ZRR5 245 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 PHF13Q86YI8 300 aaPredicted RBP2.82□□□□□ -1.96
SMC5-203ENST00000475540 CLDND2Q8NHS1 167 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BHQ93079 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BNQ99877 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H2BMQ99879 126 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 PBDC1Q9BVG4 233 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 ACER3Q9NUN7 267 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 SSR3Q9UNL2 185 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 LTBP4Q8N2S1 1624 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 COL18A1P39060 1754 aa2.82□□□□□ -1.96
SMC5-203ENST00000475540 TRBV19A0A075B6N1 114 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 C19orf71A6NCJ1 209 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 CDS2O95674 445 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 LGALS1P09382 135 aaKnown RBP2.81□□□□□ -1.96
SMC5-203ENST00000475540 NBEAP1P0C6P0 100 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 SMIM17P0DL12 118 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 HIST1H4AP62805 103 aaKnown RBP2.81□□□□□ -1.96
SMC5-203ENST00000475540 GNG5P63218 68 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 NOXRED1Q6NXP6 359 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 Q6Q795 121 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 Q8NAQ8 132 aa2.81□□□□□ -1.96
SMC5-203ENST00000475540 OR10K1Q8NGX5 313 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms