RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 V9GYH0 126 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 DNAH10Q8IVF4 4471 aa10.43□□□□□ -0.74
CCDC78-209ENST00000474647 IGHV3-35A0A0C4DH35 117 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 A0A1B0GW64 132 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 FABP12A6NFH5 140 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 SSX5O60225 188 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 DEDDO75618 318 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 ZNF735P0CB33 412 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 PTHLHP12272 177 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 MYOD1P15172 320 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 DTYMKP23919 212 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 PSMB6P28072 239 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 GPR183P32249 361 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 BMI1P35226 326 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 IL18Q14116 193 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 UNQ9165/PRO28630Q6UXU0 137 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 TMEM167AQ8TBQ9 72 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 NUDCD2Q8WVJ2 157 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 SLC2A9Q9NRM0 540 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 TAS2R8Q9NYW2 309 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 OR2W1Q9Y3N9 320 aa10.42□□□□□ -0.74
CCDC78-209ENST00000474647 IGKV1D-13A0A0B4J2D9 117 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 SULT1C2O00338 296 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 CTDSPLO15194 276 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 CLEC3BP05452 202 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 IGKV1-13P0DP09 117 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 HIST1H1BP16401 226 aaKnown RBP10.41□□□□□ -0.74
CCDC78-209ENST00000474647 PTBP1P26599 531 aaKnown RBP eCLIP10.41□□□□□ -0.74
CCDC78-209ENST00000474647 PRSS3P35030 304 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 MAS1LP35410 378 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 MRPS10P82664 201 aaKnown RBP10.41□□□□□ -0.74
CCDC78-209ENST00000474647 SPANXN2Q5MJ10 180 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 Q6ZS49 121 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 Q6ZWC4 215 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 WFDC3Q8IUB2 231 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 SNX29P2Q8IUI4 249 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 SLC38A6Q8IZM9 456 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 PUSL1Q8N0Z8 303 aaKnown RBP10.41□□□□□ -0.74
CCDC78-209ENST00000474647 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 ABHD1Q96SE0 405 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 GPHA2Q96T91 129 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 HSD17B10Q99714 261 aaKnown RBP10.41□□□□□ -0.74
CCDC78-209ENST00000474647 SCPEP1Q9HB40 452 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 TP53TG1Q9Y2A0 90 aa10.41□□□□□ -0.74
CCDC78-209ENST00000474647 HERC2O95714 4834 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 IGLV11-55A0A075B6I3 123 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 TRBV7-1A0A0A6YYK4 115 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 SLC22A5O76082 557 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 IGLV2-14P01704 120 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 CRYGCP07315 174 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 CTRB1P17538 263 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 RPL35AP18077 110 aaKnown RBP10.4□□□□□ -0.74
CCDC78-209ENST00000474647 CBX5P45973 191 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 RPL8P62917 257 aaKnown RBP10.4□□□□□ -0.74
CCDC78-209ENST00000474647 ZNF79Q15937 498 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 CTRB2Q6GPI1 263 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 MFSD4AQ8N468 514 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 GPX8Q8TED1 209 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 MARC2Q969Z3 335 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 CXorf58Q96LI9 332 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 HRASLSQ9HDD0 168 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 ANAPC10Q9UM13 185 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 UFC1Q9Y3C8 167 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 HECTD4Q9Y4D8 3996 aa10.4□□□□□ -0.74
CCDC78-209ENST00000474647 GABARAPH6UMI1 98 aa10.39□□□□□ -0.75
CCDC78-209ENST00000474647 HRASP01112 189 aa10.39□□□□□ -0.75
CCDC78-209ENST00000474647 PLET1Q6UQ28 207 aa10.39□□□□□ -0.75
CCDC78-209ENST00000474647 TMEM217Q8N7C4 229 aa10.39□□□□□ -0.75
CCDC78-209ENST00000474647 STPG3Q8N7X2 389 aa10.39□□□□□ -0.75
CCDC78-209ENST00000474647 SMIM4Q8WVI0 70 aa10.39□□□□□ -0.75
CCDC78-209ENST00000474647 SPAG8Q99932 426 aaPredicted RBP10.39□□□□□ -0.75
CCDC78-209ENST00000474647 MRPL27Q9P0M9 148 aaKnown RBP10.39□□□□□ -0.75
CCDC78-209ENST00000474647 MEIS3P1A6NDR6 274 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 TNFSF12O43508 249 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 GSTZ1O43708 216 aaPredicted RBP10.38□□□□□ -0.75
CCDC78-209ENST00000474647 CTXN2P0C2S0 81 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 C8orf88P0DMB2 117 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 HLA-GP17693 338 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 HOGA1Q86XE5 327 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 GVQW1Q8N7I0 195 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 OR52I2Q8NH67 350 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 ZNF502Q8TBZ5 544 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
CCDC78-209ENST00000474647 S100ZQ8WXG8 99 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 SRRQ9GZT4 340 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 IFT46Q9NQC8 304 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
CCDC78-209ENST00000474647 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 UBE2CO00762 179 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 RPA2P15927 270 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 NAT1P18440 290 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 RCVRNP35243 200 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 ELLP55199 621 aaPredicted RBP10.37□□□□□ -0.75
CCDC78-209ENST00000474647 BRWD1-AS2P59051 145 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 SSBP1Q04837 148 aaKnown RBP10.37□□□□□ -0.75
CCDC78-209ENST00000474647 EIF4EBP1Q13541 118 aaPredicted RBP10.37□□□□□ -0.75
CCDC78-209ENST00000474647 PYDC2Q56P42 97 aa10.37□□□□□ -0.75
CCDC78-209ENST00000474647 RNASE12Q5GAN4 147 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms