RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 OR8B2Q96RD0 313 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 NIPSNAP3BQ9BS92 247 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 C20orf24Q9BUV8 137 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 SIRT7Q9NRC8 400 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PUS1Q9Y606 427 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP39-214ENST00000474572 PXMP4Q9Y6I8 212 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 DMXL2Q8TDJ6 3036 aa7.94□□□□□ -1.14
USP39-214ENST00000474572 PPIAL4CA0A0B4J2A2 164 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PPE2 198 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 SMCO3A2RU48 225 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 TMEM8BA6NDV4 472 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 MT-ND4LP03901 98 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 CRYBA1P05813 215 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 PPIAL4GP0DN37 164 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 CTRB1P17538 263 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 AKR1C3P42330 323 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 LGALS7P47929 136 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 REG1BP48304 166 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 CD69Q07108 199 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 HNF4GQ14541 408 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 VMA21Q3ZAQ7 101 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 MIC13Q5XKP0 118 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 CTRB2Q6GPI1 263 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 TEPPQ6URK8 271 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 TMEM144Q7Z5S9 345 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 TEX45Q8NA69 505 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 CLEC7AQ9BXN2 247 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 SDF2L1Q9HCN8 221 aa7.93□□□□□ -1.14
USP39-214ENST00000474572 PCNX1Q96RV3 2341 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 LY6LH3BQJ8 138 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 BUB1B-PAK6H3BSN5 160 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 EIF3GO75821 320 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP39-214ENST00000474572 LIPFP07098 398 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 SOD3P08294 240 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 LINC00869P0C866 280 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 PRRX1P54821 245 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 GCSAMLQ5JQS6 135 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 CYP2G1PQ6ZSU1 146 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 OR4P4Q8NGL7 312 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 ITLN2Q8WWU7 325 aaPredicted RBP7.92□□□□□ -1.14
USP39-214ENST00000474572 CACNG8Q8WXS5 425 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 COMMD5Q9GZQ3 224 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 TMPRSS5Q9H3S3 457 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 CHODLQ9H9P2 273 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 PATZ1Q9HBE1 687 aaKnown RBP7.92□□□□□ -1.14
USP39-214ENST00000474572 TMEM242Q9NWH2 141 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 SLC45A2Q9UMX9 530 aa7.92□□□□□ -1.14
USP39-214ENST00000474572 AMMECR1Q9Y4X0 333 aaPredicted RBP7.92□□□□□ -1.14
USP39-214ENST00000474572 KLF2Q9Y5W3 355 aaPredicted RBP7.92□□□□□ -1.14
USP39-214ENST00000474572 IGHV1-3A0A0C4DH29 117 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PPR1 153 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 A6NNC1 897 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 C22orf46C9J442 243 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 E7EUB6 86 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 M0R1W7 72 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 DLL1O00548 723 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 HMGB3O15347 200 aaKnown RBP7.91□□□□□ -1.14
USP39-214ENST00000474572 DEFA4P12838 97 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 IGFBP2P18065 325 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 GPX4P36969 197 aaPredicted RBP7.91□□□□□ -1.14
USP39-214ENST00000474572 RND2P52198 227 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 B2MP61769 119 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 ERHP84090 104 aaKnown RBP7.91□□□□□ -1.14
USP39-214ENST00000474572 PAX2Q02962 417 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 RAB31Q13636 194 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 AKIRIN2Q53H80 203 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 PNKDQ8N490 385 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 STPG3Q8N7X2 389 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 ZNF114Q8NC26 417 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 OR11H6Q8NGC7 330 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 RNASEH2CQ8TDP1 164 aaKnown RBP7.91□□□□□ -1.14
USP39-214ENST00000474572 ISOC2Q96AB3 205 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 TIMD4Q96H15 378 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 SLC35E1Q96K37 410 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 RNF5Q99942 180 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 TXNDC17Q9BRA2 123 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 ZNF430Q9H8G1 570 aaPredicted RBP7.91□□□□□ -1.14
USP39-214ENST00000474572 MLXQ9UH92 298 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 NAT8Q9UHE5 227 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 ARL2-SNX15V9GYD0 113 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 LAMA5O15230 3695 aa7.91□□□□□ -1.14
USP39-214ENST00000474572 TLN1Q9Y490 2541 aaKnown RBP7.9□□□□□ -1.14
USP39-214ENST00000474572 SPTBN2O15020 2390 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 IGKV1OR2-108A0A075B7D4 117 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 hCG_1809904A0A1W2PP81 198 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PPI3 338 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PPV4 95 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PR64 198 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 A0A1W2PRV1 198 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 ZNF727A8MUV8 499 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 PAGE4O60829 102 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 OR2C1O95371 312 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 CXorf1O96002 111 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 CEBPGP53567 150 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 WT1-ASQ06250 92 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 GAMTQ14353 236 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 HABP2Q14520 560 aaPredicted RBP7.9□□□□□ -1.14
USP39-214ENST00000474572 SPNS3Q6ZMD2 512 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 C1QL4Q86Z23 238 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms