RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DEFB125Q8N687 156 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 GDPD1Q8N9F7 314 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 UXS1Q8NBZ7 420 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 ZNF502Q8TBZ5 544 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 VN1R17PQ8TDU5 208 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 WDR89Q96FK6 387 aaPredicted RBP15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 CMTM3Q96MX0 182 aa15.33■□□□□ 0.04
PDLIM4-206ENST00000474421 SNAPC5O75971 98 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 SERPINE2P07093 398 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 EDN2P20800 178 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 GPR183P32249 361 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 ELLP55199 621 aaPredicted RBP15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 ZFAND6Q6FIF0 208 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 LPCAT3Q6P1A2 487 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 PLET1Q6UQ28 207 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 CACNG8Q8WXS5 425 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 HIPK2Q9H2X6 1198 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 SRD5A3Q9H8P0 318 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 UFC1Q9Y3C8 167 aa15.32■□□□□ 0.04
PDLIM4-206ENST00000474421 CSMD3Q7Z407 3707 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 TEX50A0A1B0GTY4 177 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 APOA1P02647 267 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 OR13C7P0DN81 318 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 RPA2P15927 270 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 HRH1P35367 487 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 LPAR6P43657 344 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 TMEM61Q8N0U2 210 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 OR10W1Q8NGF6 305 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 IL17DQ8TAD2 202 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 FCAMRQ8WWV6 532 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 LSM10Q969L4 123 aaKnown RBP15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 ATP6V0BQ99437 205 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 SCPEP1Q9HB40 452 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 FAM212BQ9NTI7 297 aaPredicted RBP15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 FKBP11Q9NYL4 201 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 MRPL27Q9P0M9 148 aaKnown RBP15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 MLXQ9UH92 298 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 TENM2Q9NT68 2774 aa15.31■□□□□ 0.04
PDLIM4-206ENST00000474421 TRAV25A0A0B4J276 109 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 RBMY1BA6NDE4 496 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 RBMY1EA6NEQ0 496 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 KRASP01116 189 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 RBMY1DP0C7P1 496 aaKnown RBP15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 C8orf88P0DMB2 117 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 TSPAN5P62079 268 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 SLC25A24Q6NUK1 477 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 LYSMD2Q8IV50 215 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 OR52B4Q8NGK2 314 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 OR1L6Q8NGR2 347 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 GPX8Q8TED1 209 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 TSC22D3Q99576 134 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 FXYD6Q9H0Q3 95 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 NDUFA4L2Q9NRX3 87 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 COMMD3Q9UBI1 195 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 PRNDQ9UKY0 176 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 OR51B2Q9Y5P1 312 aa15.3■□□□□ 0.04
PDLIM4-206ENST00000474421 TGOLN2O43493 480 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 EIF4EP06730 217 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 HLA-DMAP28067 261 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 WT1-ASQ06250 92 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 TM4SF20Q53R12 229 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 SPSB3Q6PJ21 355 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 UNQ9165/PRO28630Q6UXU0 137 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 RBPMS2Q6ZRY4 209 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 OR5B3Q8NH48 314 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 BSCL2Q96G97 398 aaPredicted RBP15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 TMEM56Q96MV1 263 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 HINT2Q9BX68 163 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 ZNF436Q9C0F3 470 aaPredicted RBP15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 F11RQ9Y624 299 aaKnown RBP15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 SACSQ9NZJ4 4579 aa15.29■□□□□ 0.04
PDLIM4-206ENST00000474421 STARD9Q9P2P6 4700 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 LCE6AA0A183 80 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 G6PCP35575 357 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 ZNF585BQ52M93 769 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 BTNL8Q6UX41 500 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 FUNDC2Q9BWH2 189 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 WFDC10AQ9H1F0 79 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 RETNQ9HD89 108 aa15.28■□□□□ 0.04
PDLIM4-206ENST00000474421 LYSTQ99698 3801 aa15.27■□□□□ 0.04
PDLIM4-206ENST00000474421 SCAF4O95104 1147 aaKnown RBP15.27■□□□□ 0.04
PDLIM4-206ENST00000474421 RCVRNP35243 200 aa15.27■□□□□ 0.04
PDLIM4-206ENST00000474421 NCS1P62166 190 aa15.27■□□□□ 0.04
PDLIM4-206ENST00000474421 PHLDA2Q53GA4 152 aa15.27■□□□□ 0.04
PDLIM4-206ENST00000474421 TMEM190Q8WZ59 177 aa15.27■□□□□ 0.04
PDLIM4-206ENST00000474421 OR2T8A6NH00 312 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 SNX29P2Q8IUI4 249 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 SLC38A6Q8IZM9 456 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 C5orf66Q9H5L9 145 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 DAZ1Q9NQZ3 744 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 TMEM14BQ9NUH8 114 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 C21orf62Q9NYP8 219 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 NSG2Q9Y328 171 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 RYR2Q92736 4967 aa15.26■□□□□ 0.03
PDLIM4-206ENST00000474421 IGHV3-35A0A0C4DH35 117 aa15.25■□□□□ 0.03
PDLIM4-206ENST00000474421 RORCP51449 518 aa15.25■□□□□ 0.03
PDLIM4-206ENST00000474421 UCP3P55916 312 aa15.25■□□□□ 0.03
PDLIM4-206ENST00000474421 VBP1P61758 197 aa15.25■□□□□ 0.03
PDLIM4-206ENST00000474421 FAM110AQ9BQ89 295 aa15.25■□□□□ 0.03
PDLIM4-206ENST00000474421 GAR1Q9NY12 217 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms