RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 FLVCR2Q9UPI3 526 aa14.46□□□□□ -0.09
CCDC171-206ENST00000474193 A0A0G2JLM5 398 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 LINC01619G3V211 115 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 K7EIL1 84 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 MAS1LP35410 378 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 C4orf46Q504U0 113 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 C19orf54Q5BKX5 351 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 TMEM167AQ8TBQ9 72 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 ZNF430Q9H8G1 570 aaPredicted RBP14.45□□□□□ -0.1
CCDC171-206ENST00000474193 PALMDQ9NP74 551 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 NUDT15Q9NV35 164 aa14.45□□□□□ -0.1
CCDC171-206ENST00000474193 TRAV6A0A075B6T7 132 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 C13orf42A0A1B0GVH6 325 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 WI2-2373I1.2A0A1W2PRP0 233 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 H3BUA1 57 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 OVOL1O14753 267 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 SOX15O60248 233 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 CDS2O95674 445 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 LGALS1P09382 135 aaKnown RBP14.44□□□□□ -0.1
CCDC171-206ENST00000474193 H2AFB2P0C5Z0 115 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 RPL8P62917 257 aaKnown RBP14.44□□□□□ -0.1
CCDC171-206ENST00000474193 PJVKQ0ZLH3 352 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 LGI3Q8N145 548 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 GLYATL2Q8WU03 294 aa14.44□□□□□ -0.1
CCDC171-206ENST00000474193 RBPMSQ93062 196 aaKnown RBP14.44□□□□□ -0.1
CCDC171-206ENST00000474193 UPK2O00526 184 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 RBMXL2O75526 392 aaKnown RBP14.43□□□□□ -0.1
CCDC171-206ENST00000474193 SFT2D2O95562 160 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 HLA-AP01891 365 aaKnown RBP14.43□□□□□ -0.1
CCDC171-206ENST00000474193 HSPB1P04792 205 aaKnown RBP14.43□□□□□ -0.1
CCDC171-206ENST00000474193 OR4E1P0C645 316 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 ANXA7P20073 488 aaKnown RBP14.43□□□□□ -0.1
CCDC171-206ENST00000474193 PPP1R1AQ13522 171 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 TMEM187Q14656 261 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 TMEM268Q5VZI3 342 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 CADM3Q8N126 398 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 OR5T1Q8NG75 326 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 OR4A16Q8NH70 328 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 CASTOR1Q8WTX7 329 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 IL22RA2Q969J5 263 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 SEC22AQ96IW7 307 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 TMEM56Q96MV1 263 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 COMMD5Q9GZQ3 224 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 FKBP11Q9NYL4 201 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 TMEM56-RWDD3S4R434 201 aa14.43□□□□□ -0.1
CCDC171-206ENST00000474193 IGKV1-39P01597 117 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 IGKV1D-39P04432 117 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 HLA-GP17693 338 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 SUPT4H1P63272 117 aaKnown RBP14.42□□□□□ -0.1
CCDC171-206ENST00000474193 PLET1Q6UQ28 207 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 NRARPQ7Z6K4 114 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 ZNF429Q86V71 674 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 FAM219AQ8IW50 185 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 DCUN1D4Q92564 292 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 ALX4Q9H161 411 aaPredicted RBP14.42□□□□□ -0.1
CCDC171-206ENST00000474193 PRNDQ9UKY0 176 aa14.42□□□□□ -0.1
CCDC171-206ENST00000474193 PRKDCP78527 4128 aaKnown RBP14.41□□□□□ -0.1
CCDC171-206ENST00000474193 IGHV3-11P01762 117 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 FGF2P09038 288 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 CD69Q07108 199 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 SELENOHQ8IZQ5 122 aaKnown RBP14.41□□□□□ -0.1
CCDC171-206ENST00000474193 DUSP18Q8NEJ0 188 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 COQ8AQ8NI60 647 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 SPIN2AQ99865 258 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 SPIN2BQ9BPZ2 258 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 RANGRFQ9HD47 186 aaPredicted RBP14.41□□□□□ -0.1
CCDC171-206ENST00000474193 COA4Q9NYJ1 87 aa14.41□□□□□ -0.1
CCDC171-206ENST00000474193 C9orf170A2RU37 121 aa14.4□□□□□ -0.1
CCDC171-206ENST00000474193 MSGN1A6NI15 193 aa14.4□□□□□ -0.1
CCDC171-206ENST00000474193 RPL27AP46776 148 aaKnown RBP14.4□□□□□ -0.1
CCDC171-206ENST00000474193 LYG2Q86SG7 212 aa14.4□□□□□ -0.1
CCDC171-206ENST00000474193 SRSF12Q8WXF0 261 aaKnown RBP14.4□□□□□ -0.1
CCDC171-206ENST00000474193 OR4C12Q96R67 309 aa14.4□□□□□ -0.1
CCDC171-206ENST00000474193 ELOVL1Q9BW60 279 aa14.4□□□□□ -0.1
CCDC171-206ENST00000474193 A0A0B4J2A0 478 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 DUXBA0A1W2PPF3 345 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 SAP30O75446 220 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 LY86O95711 162 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 IL6RP08887 468 aaPredicted RBP14.39□□□□□ -0.11
CCDC171-206ENST00000474193 ZP3P21754 424 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 DHRS2Q13268 280 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 SLC35G3Q8N808 338 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 DLX4Q92988 240 aaPredicted RBP14.39□□□□□ -0.11
CCDC171-206ENST00000474193 LSM10Q969L4 123 aaKnown RBP14.39□□□□□ -0.11
CCDC171-206ENST00000474193 USMG5Q96IX5 58 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 FYTTD1Q96QD9 318 aaKnown RBP14.39□□□□□ -0.11
CCDC171-206ENST00000474193 PDCD10Q9BUL8 212 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 PRR13Q9NZ81 148 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 SHPKQ9UHJ6 478 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 NSG2Q9Y328 171 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 OR51B2Q9Y5P1 312 aa14.39□□□□□ -0.11
CCDC171-206ENST00000474193 IGHV4OR15-8A0A075B7B6 117 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 A0A087WW49 117 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 TRAV3A0A0B4J244 114 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 IGKV1-5P01602 117 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 OR9G9P0C7N8 305 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 SLURP1P55000 103 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 TATDN3Q17R31 274 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 MRGPRG-AS1Q2M3A8 158 aa14.38□□□□□ -0.11
CCDC171-206ENST00000474193 OR1L8Q8NGR8 309 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms