RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TMEM25Q86YD3 366 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 DEFB106AQ8N104 65 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 C11orf44Q8N8P7 122 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 OR5D14Q8NGL3 314 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 KIR2DL5BQ8NHK3 375 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 NEU4Q8WWR8 484 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-209ENST00000474157 RTN4IP1Q8WWV3 396 aaPredicted RBP6.05□□□□□ -1.44
GPNMB-209ENST00000474157 TM4SF19Q96DZ7 209 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 DUX3Q96PT4 197 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 TMEM70Q9BUB7 260 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 SFXN3Q9BWM7 321 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 TM2D2Q9BX73 214 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 SCRT2Q9NQ03 307 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 PRTFDC1Q9NRG1 225 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 LY96Q9Y6Y9 160 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 PTPN13Q12923 2485 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 PTPRDP23468 1912 aa6.05□□□□□ -1.44
GPNMB-209ENST00000474157 C2orf16Q68DN1 1984 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 TENM4Q6N022 2769 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 CASTOR2A6NHX0 329 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 ZNF850A8MQ14 1090 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 H3BUT2 72 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 PLPP3O14495 311 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 SH2D1BO14796 132 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 ANGPTL7O43827 346 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 TBL1XO60907 577 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 LDB3O75112 727 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 CA1P00915 261 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 HLA-DQA1P01909 254 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 HPNP05981 417 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 RHOCP08134 193 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 COX8AP10176 69 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 G6PCP35575 357 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 NDUFV3P56181 108 aaKnown RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 OR1D5P58170 312 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 ZNF121P58317 390 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 TIRAPP58753 221 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 TGFBR3Q03167 851 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 CATR1Q13166 79 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 FHL3Q13643 280 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 MRPL23Q16540 153 aaKnown RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 MS4A18Q3C1V0 323 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 GAGE2EQ4V326 116 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 C1orf100Q5SVJ3 147 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 DCAF12Q5T6F0 453 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 ZNF627Q7L945 461 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 RBMXL3Q8N7X1 1067 aaKnown RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 ZFP62Q8NB50 900 aaPredicted RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 COQ2Q96H96 371 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 OR2A5Q96R48 311 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 C19orf24Q9BVV8 132 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 RBM24Q9BX46 236 aaKnown RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 CLEC7AQ9BXN2 247 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 C5orf66Q9H5L9 145 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 CALHM2Q9HA72 323 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 TAAR3PQ9P1P4 343 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 CKLFQ9UBR5 152 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 GAGE2DQ9UEU5 116 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 KLHDC2Q9Y2U9 406 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 PTRH2Q9Y3E5 179 aaKnown RBP6.04□□□□□ -1.44
GPNMB-209ENST00000474157 F5P12259 2224 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 KALRNO60229 2985 aa6.04□□□□□ -1.44
GPNMB-209ENST00000474157 A0A1W2PPI3 338 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 A0A1W2PPK0 400 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 CEBPZOSA8MTT3 80 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 FAM90A26D6RGX4 464 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 SYS1-DBNDD2H3BUS1 97 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 PTGESO14684 152 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 CXorf1O96002 111 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 CRYAAP02489 173 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 CRYGDP07320 174 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 CD55P08174 381 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 NHLRC4P0CG21 123 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 PRTN3P24158 256 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 KIR2DS2P43631 304 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 SUPT4H1P63272 117 aaKnown RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 CX3CL1P78423 397 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 MEF2CQ06413 473 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 IHHQ14623 411 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 FAM78AQ5JUQ0 283 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 TRAPPC6BQ86SZ2 158 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 TMEM219Q86XT9 240 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 OSR2Q8N2R0 312 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 BCORP1Q8N888 145 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 OR9G1Q8NH87 305 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 TMEM230Q96A57 120 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 RPEQ96AT9 228 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 MSI2Q96DH6 328 aaKnown RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 MMABQ96EY8 250 aaPredicted RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 TMEM204Q9BSN7 226 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 PRORYQ9H606 182 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 IL36BQ9NZH7 164 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 MDFICQ9P1T7 246 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 LSM5Q9Y4Y9 91 aaKnown RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 YTHDF2Q9Y5A9 579 aaKnown RBP6.03□□□□□ -1.44
GPNMB-209ENST00000474157 SHROOM3Q8TF72 1996 aa6.03□□□□□ -1.44
GPNMB-209ENST00000474157 OBSL1O75147 1896 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms