RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ANKRD20A5PA0PJZ0 165 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 A8MWP6 167 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 GGCTO75223 188 aaKnown RBP7.1□□□□□ -1.27
MCF2L-223ENST00000473345 FCGR3AP08637 254 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 NAT1P18440 290 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 PRSS3P35030 304 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 CBX3Q13185 183 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 ZNF124Q15973 351 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 ODF3L2Q3SX64 289 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 OR2B11Q5JQS5 317 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 ZNF57Q68EA5 555 aaPredicted RBP7.1□□□□□ -1.27
MCF2L-223ENST00000473345 GPHB5Q86YW7 130 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 NECAP1Q8NC96 275 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 OR52B4Q8NGK2 314 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 GATAD1Q8WUU5 269 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 PHLDA1Q8WV24 401 aaPredicted RBP7.1□□□□□ -1.27
MCF2L-223ENST00000473345 FCAMRQ8WWV6 532 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 RAB3CQ96E17 227 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 GPHA2Q96T91 129 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 CMSS1Q9BQ75 279 aaKnown RBP7.1□□□□□ -1.27
MCF2L-223ENST00000473345 TECRQ9NZ01 308 aaKnown RBP7.1□□□□□ -1.27
MCF2L-223ENST00000473345 KLK11Q9UBX7 282 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 FBXL7Q9UJT9 491 aa7.1□□□□□ -1.27
MCF2L-223ENST00000473345 DNAH6Q9C0G6 4158 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 A0A1B0GVY2 172 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 TMEM235A6NFC5 223 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 MPPED1O15442 326 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 SPRY2O43597 315 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 SSX5O60225 188 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 REG1AP05451 166 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 C8orf88P0DMB2 117 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 GNB3P16520 340 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 CTRB1P17538 263 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 ARL3P36405 182 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 EIF4EBP1Q13541 118 aaPredicted RBP7.09□□□□□ -1.27
MCF2L-223ENST00000473345 KLF9Q13886 244 aaPredicted RBP7.09□□□□□ -1.27
MCF2L-223ENST00000473345 OXA1LQ15070 435 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 CDK10Q15131 360 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 KLK9Q2XQG4 91 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 LGALS9CQ6DKI2 356 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 CTRB2Q6GPI1 263 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 H1FOOQ8IZA3 346 aaPredicted RBP7.09□□□□□ -1.27
MCF2L-223ENST00000473345 OR4A4PQ8NGN8 299 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 KLK9Q9UKQ9 250 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
MCF2L-223ENST00000473345 IGKV1D-13A0A0B4J2D9 117 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 ZNF320A2RRD8 509 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 CREBL2O60519 120 aaPredicted RBP7.08□□□□□ -1.28
MCF2L-223ENST00000473345 PTTG1O95997 202 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 IGKV1-13P0DP09 117 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 RRASP10301 218 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 RPL35AP18077 110 aaKnown RBP7.08□□□□□ -1.28
MCF2L-223ENST00000473345 BTCP35070 178 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 CBX5P45973 191 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 RFX2P48378 723 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 DEFA1P59665 94 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 DEFA3P59666 94 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 NANOS2P60321 138 aaKnown RBP7.08□□□□□ -1.28
MCF2L-223ENST00000473345 RGS21Q2M5E4 152 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 VMA21Q3ZAQ7 101 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 TRIQKQ629K1 86 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 Q6ZWC4 215 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 SLC16A13Q7RTY0 426 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 TOMM5Q8N4H5 51 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 TMEM229BQ8NBD8 167 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 DUSP18Q8NEJ0 188 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 RNF183Q96D59 192 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 C7orf50Q9BRJ6 194 aaKnown RBP7.08□□□□□ -1.28
MCF2L-223ENST00000473345 TAS2R8Q9NYW2 309 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 TP53TG1Q9Y2A0 90 aa7.08□□□□□ -1.28
MCF2L-223ENST00000473345 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 IGLV11-55A0A075B6I3 123 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 IGHV3OR16-8A0A075B7F1 116 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 NPIPB5A8MRT5 1133 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 LYRM1O43325 122 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 FCGR3BO75015 233 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 TUSC2O75896 110 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 CD74P04233 296 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 CRYGCP07315 174 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 ZNF735P0CB33 412 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 DTYMKP23919 212 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 BMI1P35226 326 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 RCVRNP35243 200 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 AP3S2P59780 193 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 MRPS15P82914 257 aaKnown RBP7.07□□□□□ -1.28
MCF2L-223ENST00000473345 RTL8BQ17RB0 113 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 ZNF585BQ52M93 769 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 Q6ZNX1 250 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 Q6ZS49 121 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 HOGA1Q86XE5 327 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 PUSL1Q8N0Z8 303 aaKnown RBP7.07□□□□□ -1.28
MCF2L-223ENST00000473345 NUDCD2Q8WVJ2 157 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 ADTRPQ96IZ2 230 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 ZNF257Q9Y2Q1 563 aa7.07□□□□□ -1.28
MCF2L-223ENST00000473345 TRAV3A0A0B4J244 114 aa7.06□□□□□ -1.28
MCF2L-223ENST00000473345 NAP1L6A6NFF2 107 aa7.06□□□□□ -1.28
MCF2L-223ENST00000473345 F8W735 103 aaPredicted RBP7.06□□□□□ -1.28
MCF2L-223ENST00000473345 CLEC3BP05452 202 aa7.06□□□□□ -1.28
MCF2L-223ENST00000473345 RPA2P15927 270 aa7.06□□□□□ -1.28
MCF2L-223ENST00000473345 ATF4P18848 351 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms