RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 NBEAP1P0C6P0 100 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 ZNF793Q6ZN11 406 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 Q6ZSR6 202 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 OR11H6Q8NGC7 330 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 KLF16Q9BXK1 252 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 CCDC88CQ9P219 2028 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 SCN8AQ9UQD0 1980 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 NGFRP08138 427 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 LIMS2Q7Z4I7 341 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 ZNF625Q96I27 306 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 C1QTNF5Q9BXJ0 243 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 PLAC1Q9HBJ0 212 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 TET3O43151 1660 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 SPEF2Q9C093 1822 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 SCN9AQ15858 1988 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 VDAC2P45880 294 aaPredicted RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 UNQ6494/PRO21346Q6UXR6 183 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 GATD1Q8NB37 220 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 DYNLRB2Q8TF09 96 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 CT55Q8WUE5 264 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 FGF11Q92914 225 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 C1orf167Q5SNV9 1468 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 MYH14Q7Z406 1995 aaKnown RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 TARBP1Q13395 1621 aaKnown RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 ZCCHC11Q5TAX3 1644 aaKnown RBP7.62□□□□□ -1.19
COL6A3-210ENST00000473258 A4D1N5 150 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 CEACAM4O75871 244 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 CTSBP07858 339 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 FAM159AQ6UWV7 190 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 ASCL2Q99929 193 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 ATP23Q9Y6H3 246 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 IGLV3-10A0A075B6K4 115 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 IGHV3-15A0A0B4J1V0 119 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 MYF5P13349 255 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 RBX1P62877 108 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 FOXC1Q12948 553 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 ZXDCQ2QGD7 858 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 DUX3Q96PT4 197 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 TRBV6-7A0A0A0MS04 114 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 TRAV41A0A0B4J266 112 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 UPK2O00526 184 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 ACYP1P07311 99 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 SAA1P0DJI8 122 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 LGALS7P47929 136 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 FAM174AQ8TBP5 190 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 DUSP15Q9H1R2 295 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 CHD2O14647 1828 aaKnown RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 NPFFO15130 113 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 SCTP09683 121 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 FAM74A4Q5TZK3 123 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 RFLNBQ8N5W9 214 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 C6orf106Q9H6K1 298 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 COLQQ9Y215 455 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 TRBV5-4A0A0C4DH59 114 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 A0A1W2PPV9 198 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 PRB4P10163 310 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 DAD1P61803 113 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 MESP2Q0VG99 397 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 WIPI1Q5MNZ9 446 aaPredicted RBP7.61□□□□□ -1.19
COL6A3-210ENST00000473258 C17orf99Q6UX52 265 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 MROH1Q8NDA8 1641 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 M0QXV9 152 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 TFF3Q07654 80 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 TCF15Q12870 199 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 CRYGNQ8WXF5 182 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 ZNF319Q9P2F9 582 aa7.61□□□□□ -1.19
COL6A3-210ENST00000473258 IGHV3-21A0A0B4J1V1 117 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 A0A0G2JK05 382 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 J3QT63 122 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 IGLC1P0CG04 106 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 SIGLEC8Q9NYZ4 499 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 C9orf172C9J069 976 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 F2RL2O00254 374 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 PFN1P07737 140 aaKnown RBP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 ID1P41134 155 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 TNFAIP6P98066 277 aaPredicted RBP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 GUSBP11Q6P575 273 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 LINC00305Q7Z4B0 112 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 TCF19Q9Y242 345 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 TNFRSF18Q9Y5U5 241 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 RP1L1Q8IWN7 2480 aaPredicted RBP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 A0A1B0GX51 115 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 FABP5P3A8MUU1 101 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 CRPP02741 224 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 LYL1P12980 280 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 IFI27P40305 119 aaPredicted RBP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 RPS19BP1Q86WX3 136 aaKnown RBP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 ZNF645Q8N7E2 425 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 NUP35Q8NFH5 326 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 MCRIP2Q9BUT9 160 aaKnown RBP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 LILRA1O75019 489 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 TAL2Q16559 108 aa7.6□□□□□ -1.19
COL6A3-210ENST00000473258 SRSF7Q16629 238 aaKnown RBP eCLIP7.6□□□□□ -1.19
COL6A3-210ENST00000473258 ABHD12Q8N2K0 398 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms