RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 NSG2Q9Y328 171 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 SELENOKQ9Y6D0 94 aa6.81□□□□□ -1.32
USF1-204ENST00000472217 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 ZNF320A2RRD8 509 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 TMEM213A2RRL7 107 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 GABARAPO95166 117 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 CLEC3BP05452 202 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 SERPINE2P07093 398 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 TRAPPC2P0DI81 140 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 TRAPPC2BP0DI82 140 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 OR13C7P0DN81 318 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 CBLN1P23435 193 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 GPR183P32249 361 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 G6PCP35575 357 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 RORCP51449 518 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 TSPAN5P62079 268 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 CTF1Q16619 201 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 GUCA2BQ16661 112 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 FAM106AQ4KMX7 169 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 HSD17B13Q7Z5P4 300 aaPredicted RBP6.8□□□□□ -1.32
USF1-204ENST00000472217 CADM3Q8N126 398 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 OR1L8Q8NGR8 309 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 CITED4Q96RK1 184 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 HINT2Q9BX68 163 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 NDUFA4L2Q9NRX3 87 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 SLC2A8Q9NY64 477 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 TECRQ9NZ01 308 aaKnown RBP6.8□□□□□ -1.32
USF1-204ENST00000472217 MLXQ9UH92 298 aa6.8□□□□□ -1.32
USF1-204ENST00000472217 KMT2CQ8NEZ4 4911 aaKnown RBP6.79□□□□□ -1.32
USF1-204ENST00000472217 IGHV3-35A0A0C4DH35 117 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 DBX1A6NMT0 343 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 FAM25AB3EWG3 89 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 FAM25CB3EWG5 89 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 FAM25GB3EWG6 89 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 M0QYG6 137 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 CYB5BO43169 146 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 SNAPC5O75971 98 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 TPPPO94811 219 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 PTBP1P26599 531 aaKnown RBP eCLIP6.79□□□□□ -1.32
USF1-204ENST00000472217 MFAP2P55001 183 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 TM4SF20Q53R12 229 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 RNASE12Q5GAN4 147 aaKnown RBP6.79□□□□□ -1.32
USF1-204ENST00000472217 LPCAT3Q6P1A2 487 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 MZT2AQ6P582 158 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 UNQ9165/PRO28630Q6UXU0 137 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 LINC00322Q6ZN03 302 aaPredicted RBP6.79□□□□□ -1.32
USF1-204ENST00000472217 TBC1D26Q86UD7 250 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 TMEM61Q8N0U2 210 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 DEFB125Q8N687 156 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 UXS1Q8NBZ7 420 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 VN1R17PQ8TDU5 208 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 LSM10Q969L4 123 aaKnown RBP6.79□□□□□ -1.32
USF1-204ENST00000472217 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 THYN1Q9P016 225 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 PRNDQ9UKY0 176 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 OR51B2Q9Y5P1 312 aa6.79□□□□□ -1.32
USF1-204ENST00000472217 F11RQ9Y624 299 aaKnown RBP6.79□□□□□ -1.32
USF1-204ENST00000472217 OR2T8A6NH00 312 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 C15orf61A6NNL5 157 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 OR11H12B2RN74 326 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 TGOLN2O43493 480 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 LYL1P12980 280 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 S100GP29377 79 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 UCP3P55916 312 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 GPR107Q5VW38 600 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 ZNF57Q68EA5 555 aaPredicted RBP6.78□□□□□ -1.32
USF1-204ENST00000472217 SLC25A24Q6NUK1 477 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 PLET1Q6UQ28 207 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 BTNL8Q6UX41 500 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 SLC38A6Q8IZM9 456 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 OR5B3Q8NH48 314 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 AP3S1Q92572 193 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 ISOC1Q96CN7 298 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 SEC22AQ96IW7 307 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 TSC22D3Q99576 134 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 RETNQ9HD89 108 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 FAM212BQ9NTI7 297 aaPredicted RBP6.78□□□□□ -1.32
USF1-204ENST00000472217 TMEM14BQ9NUH8 114 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 KLK11Q9UBX7 282 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 CEPT1Q9Y6K0 416 aa6.78□□□□□ -1.32
USF1-204ENST00000472217 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 F8W735 103 aaPredicted RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 K7EIM0 57 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 SCAF4O95104 1147 aaKnown RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 CD3DP04234 171 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 C8orf88P0DMB2 117 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 ZNF182P17025 639 aaPredicted RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 RNASE10Q5GAN6 216 aaKnown RBP6.77□□□□□ -1.33
USF1-204ENST00000472217 SLC16A13Q7RTY0 426 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 OR52I2Q8NH67 350 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 SCARB1Q8WTV0 552 aa6.77□□□□□ -1.33
USF1-204ENST00000472217 TMEM190Q8WZ59 177 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms