RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SLC16A13Q7RTY0 426 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 TMEM61Q8N0U2 210 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 OR5H2Q8NGV7 314 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 ZNF502Q8TBZ5 544 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 FAM110AQ9BQ89 295 aa16.94■□□□□ 0.3
C9orf3-213ENST00000471978 MARCH11A6NNE9 402 aa16.93■□□□□ 0.3
C9orf3-213ENST00000471978 TRAPPC2P0DI81 140 aa16.93■□□□□ 0.3
C9orf3-213ENST00000471978 TRAPPC2BP0DI82 140 aa16.93■□□□□ 0.3
C9orf3-213ENST00000471978 F2RP25116 425 aa16.93■□□□□ 0.3
C9orf3-213ENST00000471978 PTBP1P26599 531 aaKnown RBP eCLIP16.93■□□□□ 0.31e-7■■■□□ 14.7
C9orf3-213ENST00000471978 UNQ9165/PRO28630Q6UXU0 137 aa16.93■□□□□ 0.3
C9orf3-213ENST00000471978 VCX3AQ9NNX9 186 aa16.93■□□□□ 0.3
C9orf3-213ENST00000471978 DNAH1Q9P2D7 4330 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 TEX50A0A1B0GTY4 177 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 CYB5BO43169 146 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 OR13C7P0DN81 318 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 NAT1P18440 290 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 PRSS3P35030 304 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 THOC7Q6I9Y2 204 aaKnown RBP16.92■□□□□ 0.3
C9orf3-213ENST00000471978 PLET1Q6UQ28 207 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 BTNL8Q6UX41 500 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 CMTM1Q8IZ96 169 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 GDPD1Q8N9F7 314 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 TSPAN14Q8NG11 270 aa16.92■□□□□ 0.3
C9orf3-213ENST00000471978 A0A087WXM4 84 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 IGHV3-35A0A0C4DH35 117 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 SCAF4O95104 1147 aaKnown RBP16.91■□□□□ 0.3
C9orf3-213ENST00000471978 SERPINE2P07093 398 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 LPAR6P43657 344 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 WT1-ASQ06250 92 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 HSD17B13Q7Z5P4 300 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-213ENST00000471978 OR52B4Q8NGK2 314 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 OR1L8Q8NGR8 309 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 OR6F1Q8NGZ6 308 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 VN1R17PQ8TDU5 208 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 FCAMRQ8WWV6 532 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 MARC2Q969Z3 335 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 DGCR14Q96DF8 476 aaKnown RBP16.91■□□□□ 0.3
C9orf3-213ENST00000471978 FXYD6Q9H0Q3 95 aa16.91■□□□□ 0.3
C9orf3-213ENST00000471978 KRASP01116 189 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 ZNF585BQ52M93 769 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 SLC25A24Q6NUK1 477 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 LYSMD2Q8IV50 215 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 SLC25A46Q96AG3 418 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 HINT2Q9BX68 163 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 NDUFA4L2Q9NRX3 87 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 UFC1Q9Y3C8 167 aa16.9■□□□□ 0.3
C9orf3-213ENST00000471978 GPR31O00270 319 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 TGOLN2O43493 480 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 C8orf88P0DMB2 117 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 HLA-DMAP28067 261 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 HRH1P35367 487 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 G6PCP35575 357 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 ANKRD55Q3KP44 614 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 MRPL27Q9P0M9 148 aaKnown RBP16.89■□□□□ 0.29
C9orf3-213ENST00000471978 NSG2Q9Y328 171 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 OR51B2Q9Y5P1 312 aa16.89■□□□□ 0.29
C9orf3-213ENST00000471978 OR2T8A6NH00 312 aa16.88■□□□□ 0.29
C9orf3-213ENST00000471978 SNAPC5O75971 98 aa16.88■□□□□ 0.29
C9orf3-213ENST00000471978 TNFAIP8O95379 198 aa16.88■□□□□ 0.29
C9orf3-213ENST00000471978 EIF4EP06730 217 aaKnown RBP16.88■□□□□ 0.29
C9orf3-213ENST00000471978 ELLP55199 621 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-213ENST00000471978 RBPMS2Q6ZRY4 209 aaKnown RBP16.88■□□□□ 0.29
C9orf3-213ENST00000471978 IL17DQ8TAD2 202 aa16.88■□□□□ 0.29
C9orf3-213ENST00000471978 LSM10Q969L4 123 aaKnown RBP16.88■□□□□ 0.29
C9orf3-213ENST00000471978 ZNF436Q9C0F3 470 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-213ENST00000471978 COMMD3Q9UBI1 195 aa16.88■□□□□ 0.29
C9orf3-213ENST00000471978 TRAV25A0A0B4J276 109 aa16.87■□□□□ 0.29
C9orf3-213ENST00000471978 CADM3Q8N126 398 aa16.87■□□□□ 0.29
C9orf3-213ENST00000471978 GPX8Q8TED1 209 aa16.87■□□□□ 0.29
C9orf3-213ENST00000471978 F11RQ9Y624 299 aaKnown RBP16.87■□□□□ 0.29
C9orf3-213ENST00000471978 IGHV3-21A0A0B4J1V1 117 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 SMIM31A0A1B0GVY4 71 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 MFAP2P55001 183 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 TSPAN5P62079 268 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 PHLDA2Q53GA4 152 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 OR1L6Q8NGR2 347 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 TMEM190Q8WZ59 177 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 BSCL2Q96G97 398 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-213ENST00000471978 PRNDQ9UKY0 176 aa16.86■□□□□ 0.29
C9orf3-213ENST00000471978 APOA1P02647 267 aa16.85■□□□□ 0.29
C9orf3-213ENST00000471978 NCS1P62166 190 aa16.85■□□□□ 0.29
C9orf3-213ENST00000471978 LPCAT3Q6P1A2 487 aa16.85■□□□□ 0.29
C9orf3-213ENST00000471978 GGTLC1Q9BX51 225 aa16.85■□□□□ 0.29
C9orf3-213ENST00000471978 FKBP11Q9NYL4 201 aa16.85■□□□□ 0.29
C9orf3-213ENST00000471978 C21orf62Q9NYP8 219 aa16.85■□□□□ 0.29
C9orf3-213ENST00000471978 S100GP29377 79 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 SPSB3Q6PJ21 355 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 SNX29P2Q8IUI4 249 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 OR5B3Q8NH48 314 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 SCARB1Q8WTV0 552 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 TMEM56Q96MV1 263 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 CMTM3Q96MX0 182 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 FUNDC2Q9BWH2 189 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 C5orf66Q9H5L9 145 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 SCPEP1Q9HB40 452 aa16.84■□□□□ 0.29
C9orf3-213ENST00000471978 LOC102724200A0A096LPH7 203 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-213ENST00000471978 VBP1P61758 197 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 TBC1D26Q86UD7 250 aa16.83■□□□□ 0.28
C9orf3-213ENST00000471978 SLC38A6Q8IZM9 456 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms