RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 LINC00311Q8N616 119 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 TSKUQ8WUA8 353 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 GPR84Q9NQS5 396 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 EURLQ9NYK6 297 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 CFAP45Q9UL16 551 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 FUT9Q9Y231 359 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 TP53TG1Q9Y2A0 90 aa-0.37□□□□□ -2.47
PRPF40A-207ENST00000471701 TRBV6-8A0A0A6YYG3 113 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 TEX50A0A1B0GTY4 177 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 INE1O15225 51 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 OR1I1O60431 355 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 RPS4Y1P22090 263 aaKnown RBP-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 OR4D2P58180 307 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 CNBPP62633 177 aaKnown RBP-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 DMTNQ08495 405 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 PDE6HQ13956 83 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 FBXO48Q5FWF7 155 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 BOD1L2Q8IYS8 172 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 EEF1AKMT1Q8WVE0 214 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 NABP2Q9BQ15 211 aa-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 PAQR5Q9NXK6 330 aaPredicted RBP-0.38□□□□□ -2.47
PRPF40A-207ENST00000471701 KIF15Q9NS87 1388 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 CLDN25C9JDP6 229 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 SMLR1H3BR10 107 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 CCRL2O00421 344 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 KDELR2P33947 212 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 RAB4BP61018 213 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 TNFAIP6P98066 277 aaPredicted RBP-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 LINC00471Q8N535 108 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 OR11H6Q8NGC7 330 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 C11orf40Q8WZ69 217 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 MS4A6AQ9H2W1 248 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 HES4Q9HCC6 221 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 C1orf109Q9NX04 203 aa-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 HRNRQ86YZ3 2850 aaPredicted RBP-0.39□□□□□ -2.47
PRPF40A-207ENST00000471701 TRAV1-1A0A0B4J248 108 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 STX10O60499 249 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 CTSDP07339 412 aaPredicted RBP-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 CRYGAP11844 174 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 SPI1P17947 270 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 CCL1P22362 96 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 CXCR4P61073 352 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 SLAMF1Q13291 335 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 KCNJ8Q15842 424 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 SPRNQ5BIV9 151 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 SYPL2Q5VXT5 272 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 OOSP2Q86WS3 158 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 DERL2Q9GZP9 239 aa-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 SNRNP200O75643 2136 aaKnown RBP-0.4□□□□□ -2.47
PRPF40A-207ENST00000471701 YEATS4O95619 227 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 APOA1P02647 267 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 SPINK7P58062 85 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 RPL18Q07020 188 aaKnown RBP-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 C1orf194Q5T5A4 169 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 Q6ZQT0 140 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 COPS6Q7L5N1 327 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 OR5L1Q8NGL2 311 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 WDR54Q9H977 334 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 CDC42SE1Q9NRR8 79 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 IL36BQ9NZH7 164 aa-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 RSL24D1Q9UHA3 163 aaKnown RBP-0.41□□□□□ -2.48
PRPF40A-207ENST00000471701 MKRN2OSH3BPM6 223 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 NEMFO60524 1076 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 NOS1APO75052 506 aaPredicted RBP-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 C1QAP02745 245 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 REG1AP05451 166 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 FGF6P10767 208 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 CD151P48509 253 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 C5orf46Q6UWT4 87 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 TMEM106AQ96A25 262 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 SIKE1Q9BRV8 207 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 AGPAT3Q9NRZ7 376 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 ACER3Q9NUN7 267 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 AK3Q9UIJ7 227 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 PXMP4Q9Y6I8 212 aa-0.42□□□□□ -2.48
PRPF40A-207ENST00000471701 IGHV1-69-2A0A0G2JMI3 117 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 LOC100506127A0A0U1RQW1 187 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 C1orf232A0A0U1RR37 186 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 TINCRA0A1B0GVN0 87 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 FTCDNL1E5RQL4 147 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 ORM1P02763 201 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 IVLP07476 585 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 SRP19P09132 144 aaKnown RBP-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 FAM228BP0C875 321 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 SSR2P43308 183 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 POLR2GP62487 172 aaKnown RBP eCLIP-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 Q3ZCU0 254 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 SPINK9Q5DT21 86 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 OR4D11Q8NGI4 311 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 CASP8AP2Q9UKL3 1982 aa-0.43□□□□□ -2.48
PRPF40A-207ENST00000471701 OR4C45A6NMZ5 311 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 FABP5P3A8MUU1 101 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 KRT75O95678 551 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 MPV17LQ2QL34 196 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 RNASE10Q5GAN6 216 aaKnown RBP-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 SOSTDC1Q6X4U4 206 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 CRLF3Q8IUI8 442 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 NDEL1Q9GZM8 345 aa-0.44□□□□□ -2.48
PRPF40A-207ENST00000471701 BDP1A6H8Y1 2624 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms