RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SOCS1O15524 211 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 NDUFA2O43678 99 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 GSTZ1O43708 216 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PDCD6O75340 191 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 CA11O75493 328 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 OR2F2O95006 317 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM50AO95807 157 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 HLA-DQB1P01920 261 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 CRYGCP07315 174 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 WNT2P09544 360 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 MUC1P15941 1255 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 BLVRBP30043 206 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 IL2RGP31785 369 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PRSS3P35030 304 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 EFNA4P52798 201 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM33P57088 247 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TAS2R20P59543 309 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 SSBP1Q04837 148 aaKnown RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 KCNJ8Q15842 424 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TAF9Q16594 264 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 SMIM21Q3B7S5 101 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PYDC2Q56P42 97 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 SPRNQ5BIV9 151 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 HACD4Q5VWC8 232 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TEX36Q5VZQ5 186 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 ACP7Q6ZNF0 438 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 DNM1P46Q6ZS02 220 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF826PQ6ZT77 177 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 Q8N402 240 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 KIR3DL3Q8N743 410 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 CHST4Q8NCG5 386 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 OR4M2Q8NGB6 313 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 OR4M1Q8NGD0 313 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 LRRC29Q8WV35 223 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 CCL17Q92583 94 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 RDH5Q92781 318 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 BORCS5Q969J3 196 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 NICN1Q9BSH3 213 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 CCDC32Q9BV29 185 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PPA2Q9H2U2 334 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PPDPFQ9H3Y8 114 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 MYOZ1Q9NP98 299 aaPredicted RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TMEM106BQ9NUM4 274 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PLEKHJ1Q9NW61 149 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 RBFOX1Q9NWB1 397 aaKnown RBP3.55□□□□□ -1.84
CCDC39-202ENST00000471307 TREM2Q9NZC2 230 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 EHFQ9NZC4 300 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 V9GYH0 126 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 DOCK11Q5JSL3 2073 aa3.55□□□□□ -1.84
CCDC39-202ENST00000471307 PTPN13Q12923 2485 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 TRAV38-1A0A0B4J264 116 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 RFPL4AA6NLU0 287 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 OR2AT4A6NND4 320 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 TRDCB7Z8K6 153 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 HSBP1L1C9JCN9 74 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 MCRIP1C9JLW8 97 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 RFPL4AL1F8VTS6 287 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 GABARAPH6UMI1 98 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 MFNGO00587 321 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 FCN1O00602 326 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 RBBP9O75884 186 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 OR7C1O76099 320 aaPredicted RBP3.54□□□□□ -1.84
CCDC39-202ENST00000471307 HAND1O96004 215 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 PSG2P11465 335 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 HIST1H1DP16402 221 aaKnown RBP3.54□□□□□ -1.84
CCDC39-202ENST00000471307 GABRR1P24046 479 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 COL8A2P25067 703 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 CBX5P45973 191 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 KCNJ3P48549 501 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 RPL8P62917 257 aaKnown RBP3.54□□□□□ -1.84
CCDC39-202ENST00000471307 MRPS15P82914 257 aaKnown RBP3.54□□□□□ -1.84
CCDC39-202ENST00000471307 PAX5Q02548 391 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 GNMTQ14749 295 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 PIGYQ3MUY2 71 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 Q6P435 159 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 UQCC3Q6UW78 93 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 ADAMTSL5Q6ZMM2 481 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 OR4A4PQ8NGN8 299 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 ANGPTL6Q8NI99 470 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 SMIM4Q8WVI0 70 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 DEDD2Q8WXF8 326 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 RAB1CQ92928 201 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 SEH1LQ96EE3 360 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 ARHGAP5-AS1Q96IT6 56 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 SEC22AQ96IW7 307 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 ZNF488Q96MN9 340 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 CCL19Q99731 98 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 FAAP24Q9BTP7 215 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 PECRQ9BY49 303 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 SRRQ9GZT4 340 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 CHST6Q9GZX3 395 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 TAS2R8Q9NYW2 309 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 SIGLEC8Q9NYZ4 499 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 TANC2Q9HCD6 1990 aa3.54□□□□□ -1.84
CCDC39-202ENST00000471307 KIAA2026Q5HYC2 2103 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 IGKV1D-17A0A075B6S4 117 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 TRBV6-6A0A0A6YYG2 114 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 A0A1W2PPE3 182 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 FUOMA2VDF0 154 aa3.53□□□□□ -1.84
CCDC39-202ENST00000471307 ISPDA4D126 451 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms