RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FBXL15Q9H469 300 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 CGB7P0DN87 165 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 OR52E5Q8NH55 327 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 SCARF2Q96GP6 870 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-210ENST00000471181 WDYHV1Q96HA8 205 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 CITO14578 2027 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 COL11A2P13942 1736 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-210ENST00000471181 TRBV5-4A0A0C4DH59 114 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 IGHV5-10-1A0A0J9YXX1 117 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 CHKB-CPT1BH3BT56 60 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 C9orf153Q5TBE3 101 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 COLCA1Q6ZS62 124 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 LINC01555Q8NAE3 123 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 ARPC1AQ92747 370 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 NAA38Q9BRA0 125 aaKnown RBP5.86□□□□□ -1.47
BRCA1-210ENST00000471181 HRKO00198 91 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 PRB2P02812 416 aaPredicted RBP5.86□□□□□ -1.47
BRCA1-210ENST00000471181 COL9A1P20849 921 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 GNG5P63218 68 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 C19orf24Q9BVV8 132 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 Q9H3A6 140 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 NBEAP1P0C6P0 100 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 CTGFP29279 349 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM92Q6UXU6 159 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 Q6ZNB5 142 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 APCDD1LQ8NCL9 501 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 PKIBQ9C010 78 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 MIXL1Q9H2W2 232 aa5.86□□□□□ -1.47
BRCA1-210ENST00000471181 CA7P43166 264 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TFF2Q03403 129 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TGIF1Q15583 401 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 RSPO3Q9BXY4 272 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-210ENST00000471181 FAM60AQ9NP50 221 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 KLHDC2Q9Y2U9 406 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 ANKRD12Q6UB98 2062 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 IGFBP2P18065 325 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TNRC6CQ9HCJ0 1690 aaKnown RBP5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TRGV11A0A075B6L2 103 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TRAV25A0A0B4J276 109 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 IGLV3-27P01718 113 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 RPL35AP18077 110 aaKnown RBP5.85□□□□□ -1.47
BRCA1-210ENST00000471181 JPT1Q9UK76 154 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 IZUMO1RA6ND01 250 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 SAP30O75446 220 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 VENTXO95231 258 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 IL9P15248 144 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TFF3Q07654 80 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 SRSF7Q16629 238 aaKnown RBP eCLIP5.85□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM54Q969K7 222 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 C21orf62Q9NYP8 219 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 PSME4Q14997 1843 aa5.85□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF729A6NN14 1252 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-210ENST00000471181 PATE3B3GLJ2 98 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 LEPROTO15243 131 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 P2RY6Q15077 328 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 ZPLD1Q8TCW7 415 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 C7orf69Q9H7B7 122 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 DLL3Q9NYJ7 618 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 LAMTOR2Q9Y2Q5 125 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 KCNE1BA0A087WTH5 132 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 A6NNC1 897 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM238C9JI98 176 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 C2orf68Q2NKX9 166 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 CD300LDQ6UXZ3 194 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 TMEM91Q6ZNR0 172 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 ATP5L2Q7Z4Y8 100 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 OR5P3Q8WZ94 311 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 DNAJC30Q96LL9 226 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 A0A1B0GW15 77 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 LHX2P50458 406 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 FXYD7P58549 80 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 SVIPQ8NHG7 77 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 C8orf46Q8TAG6 207 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 GATAD1Q8WUU5 269 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 ABHD17AQ96GS6 310 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 PRR33A8MZF0 331 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 LILRA1O75019 489 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 CIARTQ8N365 385 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-210ENST00000471181 IFI27L2Q9H2X8 130 aa5.84□□□□□ -1.47
BRCA1-210ENST00000471181 ZNF703Q9H7S9 590 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-210ENST00000471181 LSM4Q9Y4Z0 139 aaKnown RBP5.84□□□□□ -1.47
BRCA1-210ENST00000471181 GPX4P36969 197 aaPredicted RBP5.84□□□□□ -1.48
BRCA1-210ENST00000471181 C6orf226Q5I0X4 101 aa5.84□□□□□ -1.48
BRCA1-210ENST00000471181 TMEM174Q8WUU8 243 aa5.84□□□□□ -1.48
BRCA1-210ENST00000471181 FAM168AQ92567 244 aa5.84□□□□□ -1.48
BRCA1-210ENST00000471181 RPP25Q9BUL9 199 aaKnown RBP5.84□□□□□ -1.48
BRCA1-210ENST00000471181 HIGD1CA8MV81 97 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 DUSP14O95147 198 aaKnown RBP5.83□□□□□ -1.48
BRCA1-210ENST00000471181 CELA2AP08217 269 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 FOXL2P58012 376 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 ZP4Q12836 540 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 FOXL1Q12952 345 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 LINC00518Q8N0U6 118 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 MDS2Q8NDY4 140 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 RASL10AQ92737 203 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 FGF11Q92914 225 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-210ENST00000471181 TMEM8BA6NDV4 472 aa5.83□□□□□ -1.48
BRCA1-210ENST00000471181 C1QTNF12Q5T7M4 302 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms