RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 H2AFB2P0C5Z0 115 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 PSMA1P25786 263 aaKnown RBP4.92□□□□□ -1.62
SF3A3-205ENST00000470585 TAS2R31P59538 309 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 OR2B8PP59922 312 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 ARPC4P59998 168 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 EIF4EBP1Q13541 118 aaPredicted RBP4.92□□□□□ -1.62
SF3A3-205ENST00000470585 TRAM1Q15629 374 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 RAB11BQ15907 218 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 SMN1Q16637 294 aaKnown RBP4.92□□□□□ -1.62
SF3A3-205ENST00000470585 TIMM50Q3ZCQ8 353 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 PLAC9Q5JTB6 97 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 C1orf134Q5TEV5 83 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 FAM90A2PQ658T7 463 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 Q6ZTC4 211 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 SSX9Q7RTT3 188 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 ZNF367Q7RTV3 350 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 APRG1Q8IVJ8 170 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 MAPKAPK5-AS1Q8N8E1 139 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 ZFP41Q8N8Y5 198 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 TMEM116Q8NCL8 245 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 ZBTB34Q8NCN2 500 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 GINS3Q9BRX5 216 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 RHPN1-AS1Q9BWJ2 59 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 COMMD5Q9GZQ3 224 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 DCSTAMPQ9H295 470 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 RNF167Q9H6Y7 350 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 PLGRKTQ9HBL7 147 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 PLCXD1Q9NUJ7 323 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 C21orf62Q9NYP8 219 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 KCNK7Q9Y2U2 307 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 DNAH2Q9P225 4427 aa4.92□□□□□ -1.62
SF3A3-205ENST00000470585 ABCA13Q86UQ4 5058 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 ELOA3CA0A087WX78 387 aaPredicted RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 TMEM189A5PLL7 270 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 CGB1A6NKQ9 187 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 C16orf90A8MZG2 172 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 E7EUB6 86 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 MFNGO00587 321 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 NUPL2O15504 423 aaKnown RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 DENRO43583 198 aaKnown RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 IFNA10P01566 189 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 SERPINE2P07093 398 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 RBMY1A1P0DJD3 496 aaKnown RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 RBMY1CP0DJD4 496 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 NQO2P16083 231 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 HIST1H1DP16402 221 aaKnown RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 RAB6AP20340 208 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 TALDO1P37837 337 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 RBMY1FQ15415 496 aaKnown RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 ZNF773Q6PK81 442 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 Q6ZRM9 215 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 ZNF575Q86XF7 245 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 STHQ8IWL8 128 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 NANOGP1Q8N7R0 232 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 DUSP18Q8NEJ0 188 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 PYDC1Q8WXC3 89 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 BORCS5Q969J3 196 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 FAM3DQ96BQ1 224 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 RNF2Q99496 336 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 NEU1Q99519 415 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 MND1Q9BWT6 205 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 TMEM231Q9H6L2 316 aa4.91□□□□□ -1.62
SF3A3-205ENST00000470585 F11RQ9Y624 299 aaKnown RBP4.91□□□□□ -1.62
SF3A3-205ENST00000470585 TRAV14DV4A0A0A6YYC5 116 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 PNMA8CA0A1B0GUJ8 204 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 METTL21EPA6NDL7 271 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 OR2T8A6NH00 312 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 SCGNO76038 276 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 HPRT1P00492 218 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 IGLV2-14P01704 120 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 EIF4EP06730 217 aaKnown RBP4.9□□□□□ -1.63
SF3A3-205ENST00000470585 CTSGP08311 255 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 CRHBPP24387 322 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
SF3A3-205ENST00000470585 RPL30P62888 115 aaKnown RBP4.9□□□□□ -1.63
SF3A3-205ENST00000470585 CATR1Q13166 79 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 OXA1LQ15070 435 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 CNIH2Q6PI25 160 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 TRPT1Q86TN4 253 aaKnown RBP4.9□□□□□ -1.63
SF3A3-205ENST00000470585 VKORC1L1Q8N0U8 176 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 MFSD4AQ8N468 514 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 OR1L8Q8NGR8 309 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 OR10R2Q8NGX6 335 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 TCTEX1D2Q8WW35 142 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 LSM10Q969L4 123 aaKnown RBP4.9□□□□□ -1.63
SF3A3-205ENST00000470585 ZNF414Q96IQ9 312 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 C20orf24Q9BUV8 137 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 VSIRQ9H7M9 311 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 PLEKHA2Q9HB19 425 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 SEPSECSQ9HD40 501 aaKnown RBP4.9□□□□□ -1.63
SF3A3-205ENST00000470585 TMEM14BQ9NUH8 114 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 COMMD9Q9P000 198 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 PSORS1C1Q9UIG5 152 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 TBC1D24Q9ULP9 559 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 S4R3C0 116 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 X6R8D5 127 aa4.9□□□□□ -1.63
SF3A3-205ENST00000470585 DNAH17Q9UFH2 4485 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms