RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PLPPR1Q8TBJ4 325 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 RAMP3O60896 148 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 CNIH1O95406 144 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 NUDT3O95989 172 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 PPIAL4GP0DN37 164 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 IL3RAP26951 378 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
USP11-206ENST00000469080 FGF12P61328 243 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 PRR30Q53SZ7 412 aaPredicted RBP10.33□□□□□ -0.76
USP11-206ENST00000469080 OR5A2Q8NGI9 324 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 ABHD17AQ96GS6 310 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 RSG1Q9BU20 258 aa10.33□□□□□ -0.76
USP11-206ENST00000469080 TBL2Q9Y4P3 447 aaKnown RBP10.33□□□□□ -0.76
USP11-206ENST00000469080 IGLC7A0M8Q6 106 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 OR10J4P0C629 311 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 PPOXP50336 477 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 HERV-K104P63124 156 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 EWSR1Q01844 656 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP11-206ENST00000469080 GFRALQ6UXV0 394 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 LIAT1Q6ZQX7 453 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
USP11-206ENST00000469080 MRPS16Q9Y3D3 137 aaKnown RBP10.32□□□□□ -0.76
USP11-206ENST00000469080 MSTNO14793 375 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 G6PCP35575 357 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 PLP1P60201 277 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 CCL17Q92583 94 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 PRDM14Q9GZV8 571 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 CDC42EP3Q9UKI2 254 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 LRRK2Q5S007 2527 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 KIR2DS1A0A191URI9 304 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 TAX1BP3O14907 124 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 APELAP0DMC3 54 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 NTF3P20783 257 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 KIR2DS4P43632 304 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 KIR2DS1Q14954 304 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 TMEM204Q9BSN7 226 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 LRFN3Q9BTN0 628 aa10.32□□□□□ -0.76
USP11-206ENST00000469080 TRAV24A0A0B4J272 114 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 FAM90A27PA6NNH2 459 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 KIR2DL2P43627 348 aaPredicted RBP10.31□□□□□ -0.76
USP11-206ENST00000469080 LRRC10Q5BKY1 277 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 FAM71F2Q6NXP2 309 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 OR5P3Q8WZ94 311 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 SPRY4Q9C004 299 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 CRYM-AS1A6NIL9 109 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 M0R1X1 148 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 PSPNO60542 156 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 DEFA4P12838 97 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 CTRLP40313 264 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 RPL23P62829 140 aaKnown RBP10.31□□□□□ -0.76
USP11-206ENST00000469080 ZNF788Q6ZQV5 615 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 SCNM1Q9BWG6 230 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 SMPXQ9UHP9 88 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 ATP23Q9Y6H3 246 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 A0A1B0GW15 77 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 OR4P4Q8NGL7 312 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 CITED1Q99966 193 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 TM2D1Q9BX74 207 aa10.31□□□□□ -0.76
USP11-206ENST00000469080 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
USP11-206ENST00000469080 F2Z2F3 143 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 TM4SF5O14894 197 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 BHLHA15Q7RTS1 189 aaPredicted RBP10.3□□□□□ -0.76
USP11-206ENST00000469080 TAAR3PQ9P1P4 343 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 POLDIP2Q9Y2S7 368 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 TRAV8-6A0A0B4J262 113 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 DPRXA6NFQ7 191 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 J3QT63 122 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 DYNLT3P51808 116 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 HTD2P86397 168 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 LCN12Q6JVE5 192 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 SONP18583 2426 aaKnown RBP10.3□□□□□ -0.76
USP11-206ENST00000469080 IGHV2-26A0A0B4J1V2 119 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 REG1BP48304 166 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 WDR82Q6UXN9 313 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 OR2V2Q96R30 315 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 NRN1Q9NPD7 142 aa10.3□□□□□ -0.76
USP11-206ENST00000469080 DUXBA0A1W2PPF3 345 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 A0A1W2PRD5 423 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 A0A1W2PRF3 423 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 A0A1W2PRM7 423 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 FCGR3BO75015 233 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 TMEM187Q14656 261 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 GABRA6Q16445 453 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 Q6ZPA2 131 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 OR2C3Q8N628 320 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 ITLN1Q8WWA0 313 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 CACNG8Q8WXS5 425 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 RND1Q92730 232 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
USP11-206ENST00000469080 CISD1Q9NZ45 108 aaKnown RBP10.29□□□□□ -0.76
USP11-206ENST00000469080 IGKV1-6A0A0C4DH72 117 aa10.29□□□□□ -0.76
USP11-206ENST00000469080 PRRG2O14669 202 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms