RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 UFD1Q92890 307 aa13.55□□□□□ -0.24
LINC00888-201ENST00000468380 RHPN1-AS1Q9BWJ2 59 aa13.55□□□□□ -0.24
LINC00888-201ENST00000468380 C15orf62A8K5M9 175 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 ARL6IP5O75915 188 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 DTYMKP23919 212 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
LINC00888-201ENST00000468380 FABP5Q01469 135 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 FAM90A2PQ658T7 463 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 SLC25A24Q6NUK1 477 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 ZNF773Q6PK81 442 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 ZNF66Q6ZN08 573 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 Q6ZTC4 211 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 SCARB1Q8WTV0 552 aa13.54□□□□□ -0.24
LINC00888-201ENST00000468380 IGHV7-4-1A0A0J9YVY3 117 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 TNFSF12O43508 249 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 GIG44P09565 113 aaPredicted RBP13.53□□□□□ -0.24
LINC00888-201ENST00000468380 CTXN2P0C2S0 81 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 OR10A3P58181 314 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 ZNF575Q86XF7 245 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 POM121L12Q8N7R1 296 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 GDPD1Q8N9F7 314 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 TMEM116Q8NCL8 245 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 SRSF8Q9BRL6 282 aaKnown RBP13.53□□□□□ -0.24
LINC00888-201ENST00000468380 C21orf62Q9NYP8 219 aa13.53□□□□□ -0.24
LINC00888-201ENST00000468380 IGHV4-28A0A0C4DH34 117 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 C15orf61A6NNL5 157 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 MRPS14O60783 128 aaKnown RBP13.52□□□□□ -0.25
LINC00888-201ENST00000468380 SERPINE2P07093 398 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 CTSGP08311 255 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 OR13C7P0DN81 318 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 RAB6AP20340 208 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 CDNFQ49AH0 187 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 CNIH2Q6PI25 160 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 SPAG16Q8N0X2 631 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 COMMD5Q9GZQ3 224 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
LINC00888-201ENST00000468380 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-201ENST00000468380 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 TRAV10A0A0B4J240 114 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 K7EIM0 57 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 HSMCR30P0CW71 290 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 POU2AF1Q16633 256 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 LEMD1Q68G75 181 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 PVRIGQ6DKI7 326 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 NR2C2APQ86WQ0 139 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 PACRGLQ8N7B6 248 aa13.51□□□□□ -0.25
LINC00888-201ENST00000468380 QTRT1Q9BXR0 403 aaKnown RBP13.51□□□□□ -0.25
LINC00888-201ENST00000468380 TEX50A0A1B0GTY4 177 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 IFITM5A6NNB3 132 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 RANBP1P43487 201 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 LILRB2Q8N423 598 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 UBAC2Q8NBM4 344 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 ATP6V0BQ99437 205 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 RNF126Q9BV68 326 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 SCRT1Q9BWW7 348 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 ATG5Q9H1Y0 275 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 AGRNO00468 2067 aa13.5□□□□□ -0.25
LINC00888-201ENST00000468380 METTL21EPA6NDL7 271 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 SULT1C2O00338 296 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 TAS2R31P59538 309 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 DEFB131AP59861 70 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 TRAM1Q15629 374 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 HACD4Q5VWC8 232 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 FAM24BQ8N5W8 94 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 OR10C1Q96KK4 312 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 AIFM2Q9BRQ8 373 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 DCSTAMPQ9H295 470 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 TMEM140Q9NV12 185 aa13.49□□□□□ -0.25
LINC00888-201ENST00000468380 F11RQ9Y624 299 aaKnown RBP13.49□□□□□ -0.25
LINC00888-201ENST00000468380 RBFOX2O43251 390 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00888-201ENST00000468380 SSX5O60225 188 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 TRAPPC2P0DI81 140 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 TRAPPC2BP0DI82 140 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 PTHLHP12272 177 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 Q56UQ5 140 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 SECTM1Q8WVN6 248 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 C8orf4Q9NR00 106 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 PLA2G2EQ9NZK7 142 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 ANXA10Q9UJ72 324 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 X6R8D5 127 aa13.48□□□□□ -0.25
LINC00888-201ENST00000468380 CYB5BO43169 146 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 HPRT1P00492 218 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 NQO2P16083 231 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 PSMA1P25786 263 aaKnown RBP13.47□□□□□ -0.25
LINC00888-201ENST00000468380 C12orf74Q32Q52 190 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 ZNF767PQ75MW2 155 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 TCF24Q7RTU0 167 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 GIMAP1Q8WWP7 306 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 DGCR14Q96DF8 476 aaKnown RBP13.47□□□□□ -0.25
LINC00888-201ENST00000468380 NDUFA4L2Q9NRX3 87 aa13.47□□□□□ -0.25
LINC00888-201ENST00000468380 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
LINC00888-201ENST00000468380 TMEM235A6NFC5 223 aa13.46□□□□□ -0.25
LINC00888-201ENST00000468380 NUPL2O15504 423 aaKnown RBP13.46□□□□□ -0.25
LINC00888-201ENST00000468380 YIF1AO95070 293 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms