RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 GYPEP15421 78 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 CTRB1P17538 263 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 ZP3P21754 424 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 PTBP1P26599 531 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL4A6-205ENST00000468338 OR2B8PP59922 312 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 MRPS10P82664 201 aaKnown RBP8.54□□□□□ -1.04
COL4A6-205ENST00000468338 RHOGP84095 191 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 KLF5Q13887 457 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-205ENST00000468338 CTRB2Q6GPI1 263 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 SLC38A6Q8IZM9 456 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 TMEM229BQ8NBD8 167 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 NECAP1Q8NC96 275 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 ISOC1Q96CN7 298 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 SRSF8Q9BRL6 282 aaKnown RBP8.54□□□□□ -1.04
COL4A6-205ENST00000468338 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 RABL2AQ9UBK7 228 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-205ENST00000468338 PEF1Q9UBV8 284 aaKnown RBP8.54□□□□□ -1.04
COL4A6-205ENST00000468338 RABL2BQ9UNT1 228 aa8.54□□□□□ -1.04
COL4A6-205ENST00000468338 IGLC7A0M8Q6 106 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 RGS5O15539 181 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 TRBV12-3P01733 135 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 PRH1P02810 166 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 MYOD1P15172 320 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 AREGP15514 252 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 PSMB6P28072 239 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 LPAR6P43657 344 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 TAS2R19P59542 299 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 RND3P61587 244 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 DEFA5Q01523 94 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 PHLDA2Q53GA4 152 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 RNASE10Q5GAN6 216 aaKnown RBP8.53□□□□□ -1.04
COL4A6-205ENST00000468338 SMIM4Q8WVI0 70 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 ZNF486Q96H40 463 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-205ENST00000468338 FYTTD1Q96QD9 318 aaKnown RBP8.53□□□□□ -1.04
COL4A6-205ENST00000468338 RBM38Q9H0Z9 239 aaKnown RBP8.53□□□□□ -1.04
COL4A6-205ENST00000468338 HRASLSQ9HDD0 168 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
COL4A6-205ENST00000468338 DMRT1Q9Y5R6 373 aa8.53□□□□□ -1.04
COL4A6-205ENST00000468338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.52□□□□□ -1.05
COL4A6-205ENST00000468338 IGKV1-39P01597 117 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 IGKV1D-39P04432 117 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 IFNA6P05013 189 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 ATP5G2Q06055 141 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 RNASE12Q5GAN4 147 aaKnown RBP8.52□□□□□ -1.05
COL4A6-205ENST00000468338 THOC7Q6I9Y2 204 aaKnown RBP8.52□□□□□ -1.05
COL4A6-205ENST00000468338 IL34Q6ZMJ4 242 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 TBC1D26Q86UD7 250 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 DMBX1Q8NFW5 382 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 OR4D10Q8NGI6 311 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 TERB2Q8NHR7 220 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 MRGPRFQ96AM1 343 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 DIRAS2Q96HU8 199 aa8.52□□□□□ -1.05
COL4A6-205ENST00000468338 IGLV11-55A0A075B6I3 123 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 BMPR1BO00238 502 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 GSTZ1O43708 216 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-205ENST00000468338 OR2J3O76001 311 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 KRASP01116 189 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 S100GP29377 79 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 TNFSF8P32971 234 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 ERVK-16P61578 105 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 DCTN2Q13561 401 aaKnown RBP8.51□□□□□ -1.05
COL4A6-205ENST00000468338 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 STEAP1BQ6NZ63 245 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 HSD17B13Q7Z5P4 300 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-205ENST00000468338 SEC22AQ96IW7 307 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 QTRT1Q9BXR0 403 aaKnown RBP8.51□□□□□ -1.05
COL4A6-205ENST00000468338 COMMD5Q9GZQ3 224 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 NDUFA4L2Q9NRX3 87 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 SIGLEC8Q9NYZ4 499 aa8.51□□□□□ -1.05
COL4A6-205ENST00000468338 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-205ENST00000468338 TEX50A0A1B0GTY4 177 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 DPPA5A6NC42 116 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 ZNF701M0R085 212 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-205ENST00000468338 NOL3O60936 208 aaKnown RBP8.5□□□□□ -1.05
COL4A6-205ENST00000468338 SAP30O75446 220 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 NDUFB8O95169 186 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 RAB3DO95716 219 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 DHFRP00374 187 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 IGLV1-51P01701 117 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 HIST1H1BP16401 226 aaKnown RBP8.5□□□□□ -1.05
COL4A6-205ENST00000468338 G6PCP35575 357 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 WT1-ASQ06250 92 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 PMS2P11Q13670 270 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 EXOSC2Q13868 293 aaKnown RBP8.5□□□□□ -1.05
COL4A6-205ENST00000468338 MEF2DQ14814 521 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 OR9G4Q8NGQ1 327 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 OR1L8Q8NGR8 309 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 OR4C12Q96R67 309 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 PRR25Q96S07 402 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 C6orf62Q9GZU0 229 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-205ENST00000468338 TMEM14BQ9NUH8 114 aa8.5□□□□□ -1.05
COL4A6-205ENST00000468338 DBX1A6NMT0 343 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 H0Y980 276 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 SERPINE2P07093 398 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 CTSDP07339 412 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-205ENST00000468338 CSN3P07498 182 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 P0C879 139 aa8.49□□□□□ -1.05
COL4A6-205ENST00000468338 TRAPPC2P0DI81 140 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms