RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CA2P00918 260 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 IGHV4-39P01824 125 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 HSPB1P04792 205 aaKnown RBP8.22□□□□□ -1.09
MSH5-213ENST00000468136 SNRNP70P08621 437 aaKnown RBP8.22□□□□□ -1.09
MSH5-213ENST00000468136 RPL27AP46776 148 aaKnown RBP8.22□□□□□ -1.09
MSH5-213ENST00000468136 RUNX1Q01196 453 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 PSG5Q15238 335 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 KHDC3LQ587J8 217 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 SP5Q6BEB4 398 aaPredicted RBP8.22□□□□□ -1.09
MSH5-213ENST00000468136 NPBQ8NG41 125 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 OR2T10Q8NGZ9 312 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 SUN5Q8TC36 379 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 C10orf105Q8TEF2 133 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 SFT2D1Q8WV19 159 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 LINC00052Q96N35 136 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 RSG1Q9BU20 258 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 HINT2Q9BX68 163 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 SIRPDQ9H106 197 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 ZNF430Q9H8G1 570 aaPredicted RBP8.22□□□□□ -1.09
MSH5-213ENST00000468136 RPRMQ9NS64 109 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 SLC39A9Q9NUM3 307 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 C1RLQ9NZP8 487 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 ZNRD1Q9P1U0 126 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 SIGLEC9Q9Y336 463 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 LSM4Q9Y4Z0 139 aaKnown RBP8.22□□□□□ -1.09
MSH5-213ENST00000468136 DOPEY1Q5JWR5 2465 aa8.22□□□□□ -1.09
MSH5-213ENST00000468136 VWC2LB2RUY7 222 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 F8W036 122 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 RRHO14718 337 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 SLC25A17O43808 307 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 TOX4O94842 621 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 VENTXO95231 258 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 MT-CO2P00403 227 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 RNASE2P10153 161 aaKnown RBP8.21□□□□□ -1.1
MSH5-213ENST00000468136 SLC25A16P16260 332 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 GATA3P23771 443 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 BRS3P32247 399 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 RPL29P47914 159 aaKnown RBP8.21□□□□□ -1.1
MSH5-213ENST00000468136 ATP5J2P56134 94 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 EBI3Q14213 229 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 SPINK9Q5DT21 86 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 FFAR4Q5NUL3 377 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 TREML4Q6UXN2 200 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 VMO1Q7Z5L0 202 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 PPP1R27Q86WC6 154 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 NANPQ8TBE9 248 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 C22orf15Q8WYQ4 148 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 SLC35E1Q96K37 410 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 BBC3Q96PG8 261 aaPredicted RBP8.21□□□□□ -1.1
MSH5-213ENST00000468136 P2RX4Q99571 388 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 TXNDC17Q9BRA2 123 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 EIF5A2Q9GZV4 153 aaKnown RBP8.21□□□□□ -1.1
MSH5-213ENST00000468136 SLC35B3Q9H1N7 401 aa8.21□□□□□ -1.1
MSH5-213ENST00000468136 SMCO3A2RU48 225 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 SEC14L6B5MCN3 397 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 NDUFS7O75251 213 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 C1QL1O75973 258 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 NDUFA3O95167 84 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 APOC3P02656 99 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 ZFP36P26651 326 aaKnown RBP8.2□□□□□ -1.1
MSH5-213ENST00000468136 PSMB3P49720 205 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 SELENOTP62341 195 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 CD69Q07108 199 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 DIAPH2-AS1Q14236 149 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 ZNF506Q5JVG8 444 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 ZNF787Q6DD87 383 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 HCP5Q6MZN7 132 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 SPSB3Q6PJ21 355 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 OR10G9Q8NGN4 311 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 OR10G7Q8NGN6 311 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 OR1P1Q8NH06 330 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 RCC1LQ96I51 464 aaKnown RBP8.2□□□□□ -1.1
MSH5-213ENST00000468136 RNF2Q99496 336 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 MANBALQ9NQG1 85 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 SIRT7Q9NRC8 400 aa8.2□□□□□ -1.1
MSH5-213ENST00000468136 METTL1Q9UBP6 276 aaKnown RBP8.2□□□□□ -1.1
MSH5-213ENST00000468136 A0A1W2PPV4 95 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 MAP1LC3B2A6NCE7 125 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 TIMM23O14925 209 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 NBR2O15453 112 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 FAM106CPP0CH98 169 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 HOXB4P17483 251 aaPredicted RBP8.19□□□□□ -1.1
MSH5-213ENST00000468136 FHITP49789 147 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 AKR1C1Q04828 323 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 PAX8Q06710 450 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 SSX2Q16385 188 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 TMEM170AQ8WVE7 144 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 CFHR4Q92496 578 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 MAP1LC3BQ9GZQ8 125 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 NARFLQ9H6Q4 476 aa8.19□□□□□ -1.1
MSH5-213ENST00000468136 ADGRG4Q8IZF6 3080 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 FAM157AC9JC47 383 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 AGPAT2O15120 278 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 FBP1P09467 338 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 SFTA3P0C7M3 94 aa8.18□□□□□ -1.1
MSH5-213ENST00000468136 CDC34P49427 236 aaPredicted RBP8.18□□□□□ -1.1
MSH5-213ENST00000468136 LCN2P80188 198 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms