RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 GNRH2O43555 120 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF73O43830 326 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 CREBL2O60519 120 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 PRM2P04554 102 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 BPGMP07738 259 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 TFPTP0C1Z6 253 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF728P0DKX0 622 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 GABRA4P48169 554 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 DEFA3P59666 94 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 B2MP61769 119 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 HBA1P69905 142 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 CCL20P78556 96 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 RPL19P84098 196 aaKnown RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 FOXF1Q12946 379 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 HCP5Q6MZN7 132 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF705AQ6ZN79 300 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 Q6ZS52 159 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 LYG2Q86SG7 212 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 OOSP2Q86WS3 158 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 GDPD1Q8N9F7 314 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 NEK7Q8TDX7 302 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 CT55Q8WUE5 264 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 ANP32BQ92688 251 aaKnown RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 C20orf166-AS1Q96NR2 134 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 KLF6Q99612 283 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 PRRT1Q99946 306 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 HOPXQ9BPY8 73 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 SELENOSQ9BQE4 189 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF471Q9BX82 626 aaPredicted RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 CCDC90BQ9GZT6 254 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 TUBA4BQ9H853 241 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 GID8Q9NWU2 228 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 FBXL12Q9NXK8 326 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 IL36BQ9NZH7 164 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 OPTCQ9UBM4 332 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 TP73-AS1Q9UF72 201 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 NAT8Q9UHE5 227 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 PSORS1C2Q9UIG4 136 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 ATPIF1Q9UII2 106 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 FUT9Q9Y231 359 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 RBM7Q9Y580 266 aaKnown RBP0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 TIMM9Q9Y5J7 89 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 FAM215AQ9Y5M1 114 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 TMEM56-RWDD3S4R434 201 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 NUP160Q12769 1436 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 NUP155O75694 1391 aa0.95□□□□□ -2.26
GTF3C3-209ENST00000466862 DSCAMO60469 2012 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF638Q14966 1978 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 LCTP09848 1927 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 TRAV9-1A0A075B6T8 112 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 hCG_1818297A0A087WSY0 165 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 TRGV5A0A0B4J1U4 118 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 EXOC1LA0A1B0GW35 172 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 DPRXA6NFQ7 191 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 GGT3PA6NGU5 568 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 A8MT66 165 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 FABP5P3A8MUU1 101 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 C2orf74A8MZ97 194 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 H3BT86 120 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 PIRO00625 290 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HMGB3O15347 200 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 KLRC4O43908 158 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 IGKV1-5P01602 117 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 SERPINE1P05121 402 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 FABP1P07148 127 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 RBP1P09455 135 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 CCL5P13501 91 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 CBR1P16152 277 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 GZMHP20718 246 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BOP23527 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HLA-DMBP28068 263 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 ALDH3A1P30838 453 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BBP33778 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 CA5AP35218 305 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BDP58876 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BCP62807 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 RPL18Q07020 188 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 KRR1Q13601 381 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST2H2BEQ16778 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 C12orf74Q32Q52 190 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 C9orf64Q5T6V5 341 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 AADACL3Q5VUY0 350 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 TEX36Q5VZQ5 186 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 RPL22L1Q6P5R6 122 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 AGTRAPQ6RW13 159 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 ZNF767PQ75MW2 155 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 TCF24Q7RTU0 167 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 SLC36A1Q7Z2H8 476 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 TMED4Q7Z7H5 227 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 LHFPL1Q86WI0 220 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 OR5J2Q8NH18 312 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BHQ93079 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 MRPS24Q96EL2 167 aaKnown RBP0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 IMMP2LQ96T52 175 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BNQ99877 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 HIST1H2BMQ99879 126 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 VCX3BQ9H321 246 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 NDUFB11Q9NX14 153 aa0.94□□□□□ -2.26
GTF3C3-209ENST00000466862 CCL26Q9Y258 94 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms