RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 KRTCAP2Q8N6L1 136 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 KIR3DL3Q8N743 410 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 OR2T33Q8NG76 320 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 OR52R1Q8NGF1 315 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 OR52E2Q8NGJ4 325 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 OR51T1Q8NGJ9 327 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 FNDC9Q8TBE3 224 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 SLC25A40Q8TBP6 338 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 NDRG1Q92597 394 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 HPDLQ96IR7 371 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF681Q96N22 645 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 YPEL2Q96QA6 119 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 MRPL45Q9BRJ2 306 aaKnown RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF471Q9BX82 626 aaPredicted RBP2.52□□□□□ -2.01
VPS13D-203ENST00000466732 SAMD10Q9BYL1 202 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 DPY30Q9C005 99 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 COA1Q9GZY4 146 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 GABARAPL1Q9H0R8 117 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 OR2D2Q9H210 308 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 Q9H3A6 140 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 CISHQ9NSE2 258 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 AIG1Q9NVV5 245 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 TAS2R5Q9NYW4 299 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 KCNIP1Q9NZI2 227 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 CCDC167Q9P0B6 97 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ANXA10Q9UJ72 324 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 ASF1AQ9Y294 204 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 NHSL1Q5SYE7 1610 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 DENND4CQ5VZ89 1909 aa2.52□□□□□ -2.01
VPS13D-203ENST00000466732 RGPD4Q7Z3J3 1758 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 UBR2Q8IWV8 1755 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 AHDC1Q5TGY3 1603 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TRBV24-1A0A075B6N3 115 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF816-ZNF321PA0A0X1KG74 233 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 LOC285095A0A1B0GVY8 99 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 A0A1B0GW64 132 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 A6NDN8 102 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 UMAD1C9J7I0 102 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 K7EP34 96 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 CLDN5O00501 218 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 XKRYO14609 159 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 HYPMO75409 117 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 CLDN11O75508 207 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 STK17BO94768 372 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 CXCL1P09341 107 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 CT62P0C5K7 136 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SPINK8P0C7L1 97 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF728P0DKX0 622 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 CD99P14209 185 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 HIST1H1DP16402 221 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF43P17038 809 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 RPL7P18124 248 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ORM2P19652 201 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 NTF3P20783 257 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TSPOP30536 169 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 PYCR1P32322 319 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 NBL1P41271 181 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 NSG1P42857 185 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 CXCL12P48061 93 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 RND2P52198 227 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF121P58317 390 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SLC35B1P78383 322 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TNFAIP6P98066 277 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 OC90Q02509 493 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 GINS1Q14691 196 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 IL17AQ16552 155 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TAL2Q16559 108 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 RPEL1Q2QD12 228 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ACOT6Q3I5F7 207 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 GGTA1PQ4G0N0 100 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SOHLH1Q5JUK2 328 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 GLYATL3Q5SZD4 288 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 MRPL54Q6P161 138 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SBSNQ6UWP8 590 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 IGFL3Q6UXB1 125 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 C12orf54Q6X4T0 127 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZCCHC23Q6ZST2 131 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF571Q7Z3V5 609 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF547Q8IVP9 402 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 OR2L13Q8N349 312 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TOMM5Q8N4H5 51 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 LINC00471Q8N535 108 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SUMF2Q8NBJ7 301 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 OR5AK2Q8NH90 309 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 OR5P3Q8WZ94 311 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 MS4A6EQ96DS6 147 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZMYND19Q96E35 227 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 PELI1Q96FA3 418 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SDSLQ96GA7 329 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 GABRG3Q99928 467 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SNRNP25Q9BV90 132 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 WDR61Q9GZS3 305 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 DEFB129Q9H1M3 183 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 IFI27L2Q9H2X8 130 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TCEAL2Q9H3H9 227 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 PRORYQ9H606 182 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 NPVFQ9HCQ7 196 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 PARP11Q9NR21 331 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM106BQ9NUM4 274 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 DCAF13Q9NV06 445 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms