RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 S100A16Q96FQ6 103 aaKnown RBP12.11□□□□□ -0.47
BRD9-201ENST00000466684 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 MFSD2BA6NFX1 497 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 REG1AP05451 166 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 MYOD1P15172 320 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 BRWD1-AS2P59051 145 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 PLET1Q6UQ28 207 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 SPAG8Q99932 426 aaPredicted RBP12.11□□□□□ -0.47
BRD9-201ENST00000466684 C6orf62Q9GZU0 229 aaPredicted RBP12.11□□□□□ -0.47
BRD9-201ENST00000466684 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 BET1LQ9NYM9 111 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 THYN1Q9P016 225 aa12.11□□□□□ -0.47
BRD9-201ENST00000466684 FAM25AB3EWG3 89 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 FAM25CB3EWG5 89 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 FAM25GB3EWG6 89 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 HPGDSO60760 199 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 GPR183P32249 361 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 DEFB135Q30KP9 77 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 TMEM217Q8N7C4 229 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 MCFD2Q8NI22 146 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 ZNF502Q8TBZ5 544 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 HRASLSQ9HDD0 168 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 ANXA10Q9UJ72 324 aa12.1□□□□□ -0.47
BRD9-201ENST00000466684 A0A0A6YYH2 397 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 KIR2DL5BA0A0G2JN68 375 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 KIR2DL5BA0A0G2JPC4 375 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 A6NJ64 397 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 CYB5BO43169 146 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 APOA1P02647 267 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 GNG2P59768 71 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.478e-8■■■□□ 18.2
BRD9-201ENST00000466684 KIR2DL5AQ8N109 375 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 STPG3Q8N7X2 389 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 KIR2DL5BQ8NHK3 375 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 NUDCD2Q8WVJ2 157 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
BRD9-201ENST00000466684 SRSF8Q9BRL6 282 aaKnown RBP12.09□□□□□ -0.47
BRD9-201ENST00000466684 SLIRPQ9GZT3 109 aaKnown RBP12.09□□□□□ -0.47
BRD9-201ENST00000466684 TMEM235A6NFC5 223 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 CGB1A6NKQ9 187 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 TSPAN4O14817 238 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 PTBP1P26599 531 aaKnown RBP eCLIP12.08□□□□□ -0.485e-6■□□□□ 8
BRD9-201ENST00000466684 OR2B8PP59922 312 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 MSMO1Q15800 293 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 SPAG16Q8N0X2 631 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 ZNF436Q9C0F3 470 aaPredicted RBP12.08□□□□□ -0.48
BRD9-201ENST00000466684 UBQLN2Q9UHD9 624 aa12.08□□□□□ -0.48
BRD9-201ENST00000466684 TRAV18A0A075B6X5 111 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 RBFOX2O43251 390 aaKnown RBP eCLIP12.07□□□□□ -0.484e-9■■■■□ 22.7
BRD9-201ENST00000466684 EIF4EP06730 217 aaKnown RBP12.07□□□□□ -0.48
BRD9-201ENST00000466684 TMEM69Q5SWH9 247 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 ZBTB34Q8NCN2 500 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 VN1R17PQ8TDU5 208 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 TMEM190Q8WZ59 177 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 RNF183Q96D59 192 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 GPHA2Q96T91 129 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 KRTAP17-1Q9BYP8 105 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 COMMD5Q9GZQ3 224 aa12.07□□□□□ -0.48
BRD9-201ENST00000466684 DAZ1Q9NQZ3 744 aaKnown RBP12.07□□□□□ -0.48
BRD9-201ENST00000466684 IGLC7A0M8Q6 106 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 CTDSP2O14595 271 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 TGOLN2O43493 480 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 TNFSF12O43508 249 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 XRCC3O43542 346 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 ELK1P19419 428 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 S100A5P33763 92 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 TAS2R31P59538 309 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 ARPC4P59998 168 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 CATR1Q13166 79 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 SECTM1Q8WVN6 248 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 CCL28Q9NRJ3 127 aa12.06□□□□□ -0.48
BRD9-201ENST00000466684 OR4C46A6NHA9 309 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 UPK2O00526 184 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 SSX5O60225 188 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 HPRT1P00492 218 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 FGF2P09038 288 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 NQO2P16083 231 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 THOC7Q6I9Y2 204 aaKnown RBP12.05□□□□□ -0.48
BRD9-201ENST00000466684 QTRT1Q9BXR0 403 aaKnown RBP12.05□□□□□ -0.48
BRD9-201ENST00000466684 NXF2Q9GZY0 626 aaKnown RBP12.05□□□□□ -0.48
BRD9-201ENST00000466684 EXTL2Q9UBQ6 330 aa12.05□□□□□ -0.48
BRD9-201ENST00000466684 FCGR2CP31995 323 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 CNPY1Q3B7I2 92 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 ODF3L2Q3SX64 289 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 HSD17B13Q7Z5P4 300 aaPredicted RBP12.04□□□□□ -0.48
BRD9-201ENST00000466684 RPP25LQ8N5L8 163 aaKnown RBP12.04□□□□□ -0.48
BRD9-201ENST00000466684 BEST4Q8NFU0 473 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 GALNT14Q96FL9 552 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 BSCL2Q96G97 398 aaPredicted RBP12.04□□□□□ -0.48
BRD9-201ENST00000466684 DIRAS2Q96HU8 199 aa12.04□□□□□ -0.48
BRD9-201ENST00000466684 OR2T8A6NH00 312 aa12.03□□□□□ -0.48
BRD9-201ENST00000466684 SULT1C2O00338 296 aa12.03□□□□□ -0.48
BRD9-201ENST00000466684 RPL35AP18077 110 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms