RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 CD83Q01151 205 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 C19orf54Q5BKX5 351 aa9.28□□□□□ -0.92
APTX-213ENST00000465003 TEX22C9J3V5 150 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 SNAPINO95295 136 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.93
APTX-213ENST00000465003 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
APTX-213ENST00000465003 TMEM187Q14656 261 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 POU2AF1Q16633 256 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 TEX38Q6PEX7 206 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 OR52B4Q8NGK2 314 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 RNASE11Q8TAA1 199 aaKnown RBP9.27□□□□□ -0.93
APTX-213ENST00000465003 SLC25A21Q9BQT8 299 aaPredicted RBP9.27□□□□□ -0.93
APTX-213ENST00000465003 ALX4Q9H161 411 aaPredicted RBP9.27□□□□□ -0.93
APTX-213ENST00000465003 C20orf85Q9H1P6 137 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 NUDT15Q9NV35 164 aa9.27□□□□□ -0.93
APTX-213ENST00000465003 NAP1L6A6NFF2 107 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 IGHG4P01861 327 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 PSMB8P28062 276 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 RPL27AP46776 148 aaKnown RBP9.26□□□□□ -0.93
APTX-213ENST00000465003 ANKRD55Q3KP44 614 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 Q6ZRM9 215 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 FAM219AQ8IW50 185 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 FAM110DQ8TAY7 271 aaPredicted RBP9.26□□□□□ -0.93
APTX-213ENST00000465003 CITED4Q96RK1 184 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 QTRT1Q9BXR0 403 aaKnown RBP9.26□□□□□ -0.93
APTX-213ENST00000465003 COA4Q9NYJ1 87 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 FOXA2Q9Y261 457 aaPredicted RBP9.26□□□□□ -0.93
APTX-213ENST00000465003 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 LINC00862A6NCI5 91 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 ZNF98A6NK75 572 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 PCP4L1A6NKN8 68 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 CDS2O95674 445 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 IGLV1-40P01703 118 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 C11orf87Q6NUJ2 197 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 LYZL2Q7Z4W2 148 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 ZNF695Q8IW36 515 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
APTX-213ENST00000465003 TCTEX1D1Q8N7M0 179 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 DEDD2Q8WXF8 326 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 SCGB3A2Q96PL1 93 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 COMMD5Q9GZQ3 224 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 OR51B2Q9Y5P1 312 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 S4R3C0 116 aa9.26□□□□□ -0.93
APTX-213ENST00000465003 A0A0B4J293 547 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 TEX50A0A1B0GTY4 177 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 NUDT19A8MXV4 375 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 HLA-AP01891 365 aaKnown RBP9.25□□□□□ -0.93
APTX-213ENST00000465003 TCRBP04435 133 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 SLC6A1P30531 599 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 CRIP2P52943 208 aaPredicted RBP9.25□□□□□ -0.93
APTX-213ENST00000465003 TPPP2P59282 170 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 DEFA1P59665 94 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 DEFA3P59666 94 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
APTX-213ENST00000465003 AKIRIN2Q53H80 203 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 CXorf66Q5JRM2 361 aaPredicted RBP9.25□□□□□ -0.93
APTX-213ENST00000465003 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 RBPMSQ93062 196 aaKnown RBP9.25□□□□□ -0.93
APTX-213ENST00000465003 C7orf50Q9BRJ6 194 aaKnown RBP9.25□□□□□ -0.93
APTX-213ENST00000465003 GNB4Q9HAV0 340 aa9.25□□□□□ -0.93
APTX-213ENST00000465003 FAM240BA0A1B0GVZ2 78 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 C15orf61A6NNL5 157 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 CREBL2O60519 120 aaPredicted RBP9.24□□□□□ -0.93
APTX-213ENST00000465003 SNAPC5O75971 98 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 RAB9AP51151 201 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 RPL23AP62750 156 aaKnown RBP9.24□□□□□ -0.93
APTX-213ENST00000465003 ASAH1Q13510 395 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 NOXA1Q86UR1 476 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 SLC25A42Q86VD7 318 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 OR4A16Q8NH70 328 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 OR4A5Q8NH83 315 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 MARC2Q969Z3 335 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 SPIN2AQ99865 258 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 SPIN2BQ9BPZ2 258 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
APTX-213ENST00000465003 GATCO43716 136 aaKnown RBP9.24□□□□□ -0.93
APTX-213ENST00000465003 TRGV3P03979 118 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 OR4E1P0C645 316 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 P0C879 139 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 DHRS2Q13268 280 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 FOXE3Q13461 319 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 NRARPQ7Z6K4 114 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 GPR146Q96CH1 333 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 RRNAD1Q96FB5 475 aaKnown RBP9.24□□□□□ -0.93
APTX-213ENST00000465003 SEC22CQ9BRL7 303 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 TMEM14BQ9NUH8 114 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 CACNG5Q9UF02 275 aa9.24□□□□□ -0.93
APTX-213ENST00000465003 IGLC7A0M8Q6 106 aa9.23□□□□□ -0.93
APTX-213ENST00000465003 SFT2D2O95562 160 aa9.23□□□□□ -0.93
APTX-213ENST00000465003 ELANEP08246 267 aa9.23□□□□□ -0.93
APTX-213ENST00000465003 HOXA1P49639 335 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms