RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 LCE6AA0A183 80 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 FAM240BA0A1B0GVZ2 78 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 SRRM4A7MD48 611 aaKnown RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 MPTX1A8MV57 137 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DISC1C4P0D8 188 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 BUB1B-PAK6H3BSN5 160 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CCSO14618 274 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 NPFFO15130 113 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 RBP4P02753 201 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 IGKV1-16P04430 117 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CTSDP07339 412 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR5AC1P0C628 307 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 PGAM2P15259 253 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TBPP20226 339 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DUTP33316 252 aaKnown RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 RANBP1P43487 201 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 INPP1P49441 399 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 LUMP51884 338 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF137PP52743 207 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 PIGPP57054 158 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 HERV-K104P61576 105 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CD300CQ08708 224 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 EGFEM1PQ0D2K5 195 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 MEF2DQ14814 521 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 SSX2Q16385 188 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ACTBL2Q562R1 376 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DEFB121Q5J5C9 76 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CASC10Q5T4H9 136 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TPTE2P1Q5T6R2 138 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DHRS7BQ6IAN0 325 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 WDR73Q6P4I2 378 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TRAT1Q6PIZ9 186 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TBC1D26Q86UD7 250 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 VKORC1L1Q8N0U8 176 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 LINC00311Q8N616 119 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF645Q8N7E2 425 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DUSP18Q8NEJ0 188 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR2AK2Q8NG84 335 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR10A7Q8NGE5 316 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR51H1Q8NH63 302 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR9G1Q8NH87 305 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM170AQ8WVE7 144 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 RTN4IP1Q8WWV3 396 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 C7orf50Q9BRJ6 194 aaKnown RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 VPREB3Q9UKI3 123 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 SIGLEC9Q9Y336 463 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ALG5Q9Y673 324 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 HERC2O95714 4834 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DNAH1Q9P2D7 4330 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 HYDINQ4G0P3 5121 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TRAV3A0A0B4J244 114 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 IGHV1-3A0A0C4DH29 117 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 C9orf170A2RU37 121 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 NAP1L6A6NFF2 107 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CBY3A6NI87 242 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CRYM-AS1A6NIL9 109 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 INMT-MINDY4F8WBC2 141 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 H0YJW9 148 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 GPR31O00270 319 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CHST1O43916 411 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 PEX14O75381 377 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ADAP1O75689 374 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 S1PR2O95136 353 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 SIX6O95475 246 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DIRAS3O95661 229 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 PTTG1O95997 202 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 IGKV1-5P01602 117 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 IGLV2-23P01705 113 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 IFNA6P05013 189 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR4E1P0C645 316 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 AKR1C4P17516 323 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 UBE2E1P51965 193 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DHODHQ02127 395 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ZNF816Q0VGE8 651 aaPredicted RBP2.81□□□□□ -1.96
SCFD1-204ENST00000463622 DHRS2Q13268 280 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 TMEM187Q14656 261 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 RGS21Q2M5E4 152 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 LY6G6FQ5SQ64 297 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 C1orf122Q6ZSJ8 110 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 NOXA1Q86UR1 476 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 SLC25A42Q86VD7 318 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 NDUFA11Q86Y39 141 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 C8orf31Q8N9H6 132 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR4F17Q8NGA8 305 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 ENKURQ8TC29 256 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 CASTOR1Q8WTX7 329 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 GLYATL2Q8WU03 294 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 OR4F4Q96R69 305 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 PRRT1Q99946 306 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 MARVELD1Q9BSK0 173 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 GHITMQ9H3K2 345 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 SCRT2Q9NQ03 307 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 MGAT4AQ9UM21 535 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 U3KQK5 164 aa2.81□□□□□ -1.96
SCFD1-204ENST00000463622 A0A1B0GW64 132 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 C7orf66A4D0T2 115 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 E7EUB6 86 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 ITGB1BP1O14713 200 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 FCGR3BO75015 233 aa2.8□□□□□ -1.96
SCFD1-204ENST00000463622 SFT2D2O95562 160 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms