RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 OR5H6Q8NGV6 325 aa11.35□□□□□ -0.59
CMSS1-202ENST00000463526 OR5B3Q8NH48 314 aa11.35□□□□□ -0.59
CMSS1-202ENST00000463526 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
CMSS1-202ENST00000463526 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
CMSS1-202ENST00000463526 KRTAP17-1Q9BYP8 105 aa11.35□□□□□ -0.59
CMSS1-202ENST00000463526 MEIS3P1A6NDR6 274 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 UBE2CO00762 179 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 RBFOX2O43251 390 aaKnown RBP eCLIP11.34□□□□□ -0.591e-6■■■■■ 27.4
CMSS1-202ENST00000463526 DEDDO75618 318 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 TRAPPC2P0DI81 140 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 TRAPPC2BP0DI82 140 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 ODF3L2Q3SX64 289 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 ZNF818PQ6ZRF7 136 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 TPRA1Q86W33 373 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 HOGA1Q86XE5 327 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 UBAC2Q8NBM4 344 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 VN1R17PQ8TDU5 208 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 RNF183Q96D59 192 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 CHRDL1Q9BU40 450 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 SSR3Q9UNL2 185 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 DNAH10Q8IVF4 4471 aa11.34□□□□□ -0.59
CMSS1-202ENST00000463526 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 CYB5BO43169 146 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 CTSDP07339 412 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-202ENST00000463526 FGF9P31371 208 aaPredicted RBP11.33□□□□□ -0.6
CMSS1-202ENST00000463526 SDC2P34741 201 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 WT1-ASQ06250 92 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 MSMO1Q15800 293 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 POU2AF1Q16633 256 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 IDNKQ5T6J7 187 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 GDPD1Q8N9F7 314 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
CMSS1-202ENST00000463526 VCX3BQ9H321 246 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 DAZ1Q9NQZ3 744 aaKnown RBP11.33□□□□□ -0.6
CMSS1-202ENST00000463526 NSG2Q9Y328 171 aa11.33□□□□□ -0.6
CMSS1-202ENST00000463526 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 SERPINE2P07093 398 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-202ENST00000463526 TFPI2P48307 235 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 HSPA13P48723 471 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 MFAP2P55001 183 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 ERVK-16P61578 105 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 ZNF124Q15973 351 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 Q56UQ5 140 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 UBE2UQ5VVX9 321 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 OR1L8Q8NGR8 309 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 PHLDA1Q8WV24 401 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-202ENST00000463526 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 BSCL2Q96G97 398 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-202ENST00000463526 RNF167Q9H6Y7 350 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 PLEKHA2Q9HB19 425 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 C21orf62Q9NYP8 219 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
CMSS1-202ENST00000463526 IGKV3-7A0A075B6H7 116 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 NDUFA4O00483 81 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 HERV-K104P61576 105 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 SPARTQ8N0X7 666 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 KIR2DL5BQ8NHK3 375 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 CD300LFQ8TDQ1 290 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 SCARB1Q8WTV0 552 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 GIMAP1Q8WWP7 306 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 AUNIPQ9H7T9 357 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 MAP6D1Q9H9H5 199 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
CMSS1-202ENST00000463526 KRASP01116 189 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 RLN1P04808 185 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 ADMP35318 185 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 LPAR6P43657 344 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 GABARAPL2P60520 117 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 SPSB3Q6PJ21 355 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 DIABLOQ9NR28 239 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 NDUFA4L2Q9NRX3 87 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 COMMD9Q9P000 198 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 OR51B2Q9Y5P1 312 aa11.3□□□□□ -0.6
CMSS1-202ENST00000463526 F11RQ9Y624 299 aaKnown RBP11.3□□□□□ -0.6
CMSS1-202ENST00000463526 IGHV3OR16-13A0A075B7E8 117 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 IGHV3-74A0A0B4J1X5 117 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 LOC100506127A0A0U1RQW1 187 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 F8W735 103 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-202ENST00000463526 YIF1AO95070 293 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 GNRHRP30968 328 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 G6PCP35575 357 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 THOC7Q6I9Y2 204 aaKnown RBP11.29□□□□□ -0.6
CMSS1-202ENST00000463526 HSD17B13Q7Z5P4 300 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-202ENST00000463526 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
CMSS1-202ENST00000463526 RNF2Q99496 336 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 C6orf62Q9GZU0 229 aaPredicted RBP11.29□□□□□ -0.6
CMSS1-202ENST00000463526 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 FBXL17Q9UF56 701 aa11.29□□□□□ -0.6
CMSS1-202ENST00000463526 SMPXQ9UHP9 88 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms