RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 HLA-AP01891 365 aaKnown RBP11.87□□□□□ -0.51
SND1-203ENST00000463020 TMEM267Q0VDI3 215 aaPredicted RBP11.87□□□□□ -0.51
SND1-203ENST00000463020 DHRS2Q13268 280 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 OPCMLQ14982 345 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 ZNF562Q6V9R5 426 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 ZNF383Q8NA42 475 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 TERB2Q8NHR7 220 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 GALMQ96C23 342 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 FAAP24Q9BTP7 215 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 ZNF355PQ9NSJ1 428 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 PLEKHJ1Q9NW61 149 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 COMMD9Q9P000 198 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 WASHC3Q9Y3C0 194 aa11.87□□□□□ -0.51
SND1-203ENST00000463020 OR5H14A6NHG9 310 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 G3V3Q6 166 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 H7C2Y5 167 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 SIX6O95475 246 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 ZBTB25P24278 435 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 RAB14P61106 215 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 FAM71F2Q6NXP2 309 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 C6orf201Q7Z4U5 140 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 DEFB125Q8N687 156 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 ZNF680Q8NEM1 530 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
SND1-203ENST00000463020 PDCD10Q9BUL8 212 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 ST6GALNAC5Q9BVH7 336 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 UBQLN2Q9UHD9 624 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 HSF4Q9ULV5 492 aa11.86□□□□□ -0.51
SND1-203ENST00000463020 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 FXYD6-FXYD2A0A087WZ82 144 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 C9orf170A2RU37 121 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 RAB29O14966 203 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 GLAP06280 429 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 CD7P09564 240 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 HLA-GP17693 338 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 ZP3P21754 424 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 FXYD3Q14802 87 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 LINC00476Q8WZB0 136 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 FXYD6Q9H0Q3 95 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 RNF150Q9ULK6 438 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 SELENOKQ9Y6D0 94 aa11.85□□□□□ -0.51
SND1-203ENST00000463020 A0A0B4J2A0 478 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 H0Y980 276 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 SLC25A17O43808 307 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 NAPSAO96009 420 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 APELAP0DMC3 54 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 AKR1C4P17516 323 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 VAMP1P23763 118 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 H2BFSP57053 126 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 ARPC4P59998 168 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 CD81P60033 236 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 PPP1R1AQ13522 171 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
SND1-203ENST00000463020 GTSCR1Q86UQ5 136 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 OR5AP2Q8NGF4 316 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 MARCH1Q8TCQ1 289 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 EHFQ9NZC4 300 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 SHPKQ9UHJ6 478 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
SND1-203ENST00000463020 RYR1P21817 5038 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 ZNF785A8K8V0 405 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 DTYMKP23919 212 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 S100A11P31949 105 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 TMEM128Q5BJH2 165 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 ZNF343Q6P1L6 599 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 TMUB2Q71RG4 321 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 COQ8AQ8NI60 647 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 GPR132Q9UNW8 380 aa11.83□□□□□ -0.52
SND1-203ENST00000463020 C14orf166Q9Y224 244 aaKnown RBP11.83□□□□□ -0.52
SND1-203ENST00000463020 A0A0D9SG52 128 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 ARPC5O15511 151 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 CRYGBP07316 175 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 PGAM2P15259 253 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 RPA2P15927 270 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 CXCL2P19875 107 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 MC5RP33032 325 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 RPS16P62249 146 aaKnown RBP11.82□□□□□ -0.52
SND1-203ENST00000463020 CYCSP99999 105 aaKnown RBP11.82□□□□□ -0.52
SND1-203ENST00000463020 EWSR1Q01844 656 aaKnown RBP eCLIP11.82□□□□□ -0.52
SND1-203ENST00000463020 CD300EQ496F6 205 aaPredicted RBP11.82□□□□□ -0.52
SND1-203ENST00000463020 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 GSG1LQ6UXU4 331 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 BVESQ8NE79 360 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 MRGPRFQ96AM1 343 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
SND1-203ENST00000463020 CMSS1Q9BQ75 279 aaKnown RBP11.82□□□□□ -0.52
SND1-203ENST00000463020 PEF1Q9UBV8 284 aaKnown RBP11.82□□□□□ -0.52
SND1-203ENST00000463020 IGKV1-6A0A0C4DH72 117 aa11.81□□□□□ -0.52
SND1-203ENST00000463020 LINC00862A6NCI5 91 aa11.81□□□□□ -0.52
SND1-203ENST00000463020 BMPR1BO00238 502 aa11.81□□□□□ -0.52
SND1-203ENST00000463020 SFT2D2O95562 160 aa11.81□□□□□ -0.52
SND1-203ENST00000463020 SLC25A4P12235 298 aa11.81□□□□□ -0.52
SND1-203ENST00000463020 EXOSC2Q13868 293 aaKnown RBP11.81□□□□□ -0.52
SND1-203ENST00000463020 KCTD9Q7L273 389 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms