RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TNFRSF14Q92956 283 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 TMEM186Q96B77 213 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 ADTRPQ96IZ2 230 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 C1QTNF4Q9BXJ3 329 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 F8P00451 2351 aa5.88□□□□□ -1.47
UBE4B-204ENST00000462658 DSCAML1Q8TD84 2053 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 FXYD6-FXYD2A0A087WZ82 144 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 TRAV14DV4A0A0A6YYC5 116 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 IGHV2-70DA0A0C4DH43 119 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 RAMP3O60896 148 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 FCGR3BO75015 233 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 ATG12O94817 140 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 S1PR2O95136 353 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 MPC2O95563 127 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 HPRT1P00492 218 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 CT45A6P0DMU7 189 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 CT45A5P0DMU8 189 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 CT45A7P0DMV0 189 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 SLC25A4P12235 298 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 SLC25A16P16260 332 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 PRTN3P24158 256 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 COX7A1P24310 79 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 IL3RAP26951 378 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 KIR2DS2P43631 304 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 DLX1P56177 255 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
UBE4B-204ENST00000462658 PAX2Q02962 417 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 PRB3Q04118 309 aaPredicted RBP5.87□□□□□ -1.47
UBE4B-204ENST00000462658 HLA-DRB5Q30154 266 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 DEFB113Q30KQ7 82 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 LRRC37A5PQ49AS3 106 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 NMSQ5H8A3 153 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF833PQ6ZTB9 187 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 LRRC75A-AS1Q8N1F1 130 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 PNKDQ8N490 385 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF383Q8NA42 475 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 RNASE11Q8TAA1 199 aaKnown RBP5.87□□□□□ -1.47
UBE4B-204ENST00000462658 GRPEL2Q8TAA5 225 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 THAP6Q8TBB0 222 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 LSM10Q969L4 123 aaKnown RBP5.87□□□□□ -1.47
UBE4B-204ENST00000462658 GPR146Q96CH1 333 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 SPIN2AQ99865 258 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 SPIN2BQ9BPZ2 258 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 CLEC7AQ9BXN2 247 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 HEXA-AS1Q9H8Q6 139 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 SIRT7Q9NRC8 400 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 MMP26Q9NRE1 261 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 KPTNQ9Y664 436 aa5.87□□□□□ -1.47
UBE4B-204ENST00000462658 MAP1AP78559 2803 aaPredicted RBP5.87□□□□□ -1.47
UBE4B-204ENST00000462658 YLPM1P49750 1951 aaKnown RBP5.86□□□□□ -1.47
UBE4B-204ENST00000462658 A0A0G2JRQ6 117 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 A0A1B0GU03 582 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 HMSDA8MTL9 139 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 BUB1B-PAK6H3BSN5 160 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 RBFOX2O43251 390 aaKnown RBP eCLIP5.86□□□□□ -1.47
UBE4B-204ENST00000462658 SNAPC5O75971 98 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 SCGB1D1O95968 90 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 KRASP01116 189 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 IGKV1-5P01602 117 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 IGLV1-47P01700 117 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 RLN2P04090 185 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 SLC25A6P12236 298 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 USF1P22415 310 aaPredicted RBP5.86□□□□□ -1.47
UBE4B-204ENST00000462658 G6PCP35575 357 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 REG1BP48304 166 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF137PP52743 207 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 AKR1C2P52895 323 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 DVL1P1P54792 670 aaPredicted RBP5.86□□□□□ -1.47
UBE4B-204ENST00000462658 S100A10P60903 97 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 THOC7Q6I9Y2 204 aaKnown RBP5.86□□□□□ -1.47
UBE4B-204ENST00000462658 LAMTOR1Q6IAA8 161 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 FAM71F2Q6NXP2 309 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 VMO1Q7Z5L0 202 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 ZNF546Q86UE3 836 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 FAM219AQ8IW50 185 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 C9orf62Q8N4C0 152 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 OR11H6Q8NGC7 330 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 OR4D5Q8NGN0 318 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 OR4S2Q8NH73 311 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 ST6GALNAC6Q969X2 333 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 HARBI1Q96MB7 349 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 RNF126Q9BV68 326 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 LPAR2Q9HBW0 351 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 AMMECR1Q9Y4X0 333 aaPredicted RBP5.86□□□□□ -1.47
UBE4B-204ENST00000462658 MMP24Q9Y5R2 645 aa5.86□□□□□ -1.47
UBE4B-204ENST00000462658 ACANP16112 2415 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 MED13LQ71F56 2210 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 ARPC5O15511 151 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 ST8SIA3O43173 380 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 CRYZL1O95825 349 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 APOA2P02652 100 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 GAPDHP04406 335 aaKnown RBP5.85□□□□□ -1.47
UBE4B-204ENST00000462658 ARG1P05089 322 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 PET100P0DJ07 73 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 RRASP10301 218 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 KRTAP1-1Q07627 177 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 KLRD1Q13241 179 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 DIAPH2-AS1Q14236 149 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 SMCO1Q147U7 214 aa5.85□□□□□ -1.47
UBE4B-204ENST00000462658 RTL8BQ17RB0 113 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms