RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PLEKHA3Q9HB20 300 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 SLC35D1Q9NTN3 355 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 CT45A6P0DMU7 189 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 CT45A5P0DMU8 189 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 CT45A7P0DMV0 189 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 PRNDQ9UKY0 176 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 DYSFO75923 2080 aa13.87□□□□□ -0.19
ACTB-207ENST00000462494 SRRM4A7MD48 611 aaKnown RBP13.86□□□□□ -0.19
ACTB-207ENST00000462494 KLK10O43240 276 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 CD99P14209 185 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 CEACAM8P31997 349 aaPredicted RBP13.86□□□□□ -0.19
ACTB-207ENST00000462494 RTL8BQ17RB0 113 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 MOB3BQ86TA1 216 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 TXNDC17Q9BRA2 123 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 TYMSP04818 313 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 RPL29P47914 159 aaKnown RBP13.86□□□□□ -0.19
ACTB-207ENST00000462494 SLC25A48Q6ZT89 311 aaKnown RBP13.86□□□□□ -0.19
ACTB-207ENST00000462494 WFDC8Q8IUA0 241 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 SGMS2Q8NHU3 365 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 FAM57AQ8TBR7 257 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 ACY3Q96HD9 319 aa13.86□□□□□ -0.19
ACTB-207ENST00000462494 RPUSD1Q9UJJ7 312 aaKnown RBP13.86□□□□□ -0.19
ACTB-207ENST00000462494 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
ACTB-207ENST00000462494 LCN2P80188 198 aa13.85□□□□□ -0.19
ACTB-207ENST00000462494 OCC1Q8TAD7 63 aa13.85□□□□□ -0.19
ACTB-207ENST00000462494 PRO1933Q9H354 126 aa13.85□□□□□ -0.19
ACTB-207ENST00000462494 AKAP13Q12802 2813 aa13.85□□□□□ -0.19
ACTB-207ENST00000462494 UPK2O00526 184 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 TM4SF5O14894 197 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 MT-CO2P00403 227 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 CCKARP32238 428 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 RPL31P62899 125 aaKnown RBP13.84□□□□□ -0.19
ACTB-207ENST00000462494 TMEM108Q6UXF1 575 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 MIR17HGQ75NE6 70 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 TRAPPC1Q9Y5R8 145 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 TNCP24821 2201 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 PRCDQ00LT1 54 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 DEFA6Q01524 100 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 POU2AF1Q16633 256 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 NEUROG1Q92886 237 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 SH3BGRL2Q9UJC5 107 aa13.84□□□□□ -0.19
ACTB-207ENST00000462494 TEX50A0A1B0GTY4 177 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 GATA2P23769 480 aaPredicted RBP13.83□□□□□ -0.2
ACTB-207ENST00000462494 COA6Q5JTJ3 125 aaKnown RBP13.83□□□□□ -0.2
ACTB-207ENST00000462494 CORO2AQ92828 525 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 SLC25A10Q9UBX3 287 aaPredicted RBP13.83□□□□□ -0.2
ACTB-207ENST00000462494 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 OR4A8P0C604 315 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
ACTB-207ENST00000462494 CNN1P51911 297 aaKnown RBP13.83□□□□□ -0.2
ACTB-207ENST00000462494 PRR20EP86478 221 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 PRR20CP86479 221 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 PRR20DP86480 221 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 PRR20BP86481 221 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 PRR20AP86496 221 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 KRTCAP3Q53RY4 240 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 TEX36Q5VZQ5 186 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 TMEM144Q7Z5S9 345 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 LINC00574Q9H8X3 128 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 BSNQ9UPA5 3926 aa13.83□□□□□ -0.2
ACTB-207ENST00000462494 DVL1O14640 695 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 LINC00869P0C866 280 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 CCL3L1P16619 93 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 TNFRSF1AP19438 455 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 REG1BP48304 166 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 FOXL1Q12952 345 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 JOSD1Q15040 202 aaPredicted RBP13.82□□□□□ -0.2
ACTB-207ENST00000462494 PSG5Q15238 335 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 MLANAQ16655 118 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 NUP37Q8NFH4 326 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 OR10W1Q8NGF6 305 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 OR10G8Q8NGN5 311 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 UHRF2Q96PU4 802 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 IMMP2LQ96T52 175 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 ZNF257Q9Y2Q1 563 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 LINC00312Q9Y6C7 94 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 ROS1P08922 2347 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 ATMQ13315 3056 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 A0A0G2JNJ9 132 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 GZMBP10144 247 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 PDLIM4P50479 330 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 RPL15P61313 204 aaKnown RBP13.82□□□□□ -0.2
ACTB-207ENST00000462494 DNLZQ5SXM8 178 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 TEX38Q6PEX7 206 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 NABP2Q9BQ15 211 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 MRPL20Q9BYC9 149 aaKnown RBP13.82□□□□□ -0.2
ACTB-207ENST00000462494 ELOVL5Q9NYP7 299 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 Q9UFV3 132 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 SLC45A2Q9UMX9 530 aa13.82□□□□□ -0.2
ACTB-207ENST00000462494 ZNF292O60281 2723 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 IGKV1OR2-108A0A075B7D4 117 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 TSTD3H0UI37 97 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 C16orf97H3BN30 126 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 PKIAP61925 76 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 OR5R1Q8NH85 324 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
ACTB-207ENST00000462494 WFIKKN1Q96NZ8 548 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 GAL3ST2Q9H3Q3 398 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 ZNF318Q5VUA4 2279 aa13.81□□□□□ -0.2
ACTB-207ENST00000462494 C17orf100A8MU93 164 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms