RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TMEM140Q9NV12 185 aa6.77□□□□□ -1.33
LDB1-203ENST00000461873 COMMD9Q9P000 198 aa6.77□□□□□ -1.33
LDB1-203ENST00000461873 TNCP24821 2201 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 BMPR1BO00238 502 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 GPR31O00270 319 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 UPK2O00526 184 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 LCE2BO14633 110 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 OR2C1O95371 312 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 CLEC3BP05452 202 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 CRYGCP07315 174 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 TRAPPC2P0DI81 140 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 TRAPPC2BP0DI82 140 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 FOLR2P14207 255 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 RPA2P15927 270 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 F2RP25116 425 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 HLA-DMAP28067 261 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 RFX2P48378 723 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 ZNF57Q68EA5 555 aaPredicted RBP6.76□□□□□ -1.33
LDB1-203ENST00000461873 LINC00299Q6ZSB3 139 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 GPHB5Q86YW7 130 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 OR1L8Q8NGR8 309 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 OR52I2Q8NH67 350 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 OR4A16Q8NH70 328 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 C15orf40Q8WUR7 153 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 CMTM3Q96MX0 182 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 NEURL2Q9BR09 285 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 UFC1Q9Y3C8 167 aa6.76□□□□□ -1.33
LDB1-203ENST00000461873 C2orf70A6NJV1 201 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 MARCH11A6NNE9 402 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 A8MZ25 164 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 TEX22C9J3V5 150 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 LGALS9O00182 355 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PGLYRP1O75594 196 aaPredicted RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 ATG12O94817 140 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 S1PR2O95136 353 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 NDUFB8O95169 186 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 KRASP01116 189 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 HLA-AP01891 365 aaKnown RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 SERPINE2P07093 398 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 IL6RP08887 468 aaPredicted RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 OR13C7P0DN81 318 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 MYOD1P15172 320 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 AREGP15514 252 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 CTRB1P17538 263 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 GNRHRP30968 328 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 RCVRNP35243 200 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 HRH1P35367 487 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 LPAR6P43657 344 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PRR20EP86478 221 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PRR20CP86479 221 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PRR20DP86480 221 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PRR20BP86481 221 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PRR20AP86496 221 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 MRGPRG-AS1Q2M3A8 158 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 CTRB2Q6GPI1 263 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 LAMTOR1Q6IAA8 161 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 DHRS11Q6UWP2 260 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 H2BFWTQ7Z2G1 175 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 SLC38A6Q8IZM9 456 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 UBAC2Q8NBM4 344 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 OR52B4Q8NGK2 314 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 LSM10Q969L4 123 aaKnown RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 MARC2Q969Z3 335 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 MOB3AQ96BX8 217 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 THAP7Q9BT49 309 aaPredicted RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 PDCD10Q9BUL8 212 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 SCPEP1Q9HB40 452 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 GAR1Q9NY12 217 aaKnown RBP6.75□□□□□ -1.33
LDB1-203ENST00000461873 KLK11Q9UBX7 282 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 PRNDQ9UKY0 176 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 OR51B2Q9Y5P1 312 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 S4R3C0 116 aa6.75□□□□□ -1.33
LDB1-203ENST00000461873 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 SCGB2A1O75556 95 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 UPK1BO75841 260 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 FGF2P09038 288 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 IL7P13232 177 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 PGAM2P15259 253 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 CBLN1P23435 193 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 GPR183P32249 361 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 OR2B8PP59922 312 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 EIF4EBP1Q13541 118 aaPredicted RBP6.74□□□□□ -1.33
LDB1-203ENST00000461873 DEFB114Q30KQ6 69 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 PHLDA2Q53GA4 152 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 Q56UQ5 140 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 GDPD1Q8N9F7 314 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 RNASE11Q8TAA1 199 aaKnown RBP6.74□□□□□ -1.33
LDB1-203ENST00000461873 PLEKHA3Q9HB20 300 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 ZC4H2Q9NQZ6 224 aa6.74□□□□□ -1.33
LDB1-203ENST00000461873 COL7A1Q02388 2944 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 PTBP1P26599 531 aaKnown RBP eCLIP6.73□□□□□ -1.33
LDB1-203ENST00000461873 G6PCP35575 357 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
LDB1-203ENST00000461873 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 HAGHQ16775 308 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 ZNF585BQ52M93 769 aa6.73□□□□□ -1.33
LDB1-203ENST00000461873 RNASE10Q5GAN6 216 aaKnown RBP6.73□□□□□ -1.33
LDB1-203ENST00000461873 SPSB3Q6PJ21 355 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms