RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 RPL12P30050 165 aaKnown RBP12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 AP2S1P53680 142 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 F2RL1P55085 397 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 AANATQ16613 207 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 PRSS8Q16651 343 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 PDLIM3Q53GG5 364 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 C12orf54Q6X4T0 127 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 RBMS3Q6XE24 437 aaKnown RBP12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 C9orf62Q8N4C0 152 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 C22orf15Q8WYQ4 148 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 SMIM8Q96KF7 97 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 SSX3Q99909 188 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 FBXL15Q9H469 300 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 HEYLQ9NQ87 328 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 TCF19Q9Y242 345 aa12.12□□□□□ -0.47
TMEM39A-203ENST00000461654 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 CLDN34H7C241 214 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 CRYGBP07316 175 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 ZNF345Q14585 488 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 TNXAQ16473 311 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 Q8N6K4 173 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 PLEKHA3Q9HB20 300 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 LYRM2Q9NU23 88 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 PITPNC1Q9UKF7 332 aa12.11□□□□□ -0.47
TMEM39A-203ENST00000461654 A0A1W2PN81 502 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 KANTRA0A1W2PQU2 76 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 TSC22D2O75157 780 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 NDUFA3O95167 84 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 CXCL2P19875 107 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 CHRNA7P36544 502 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 GNB1P62873 340 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 PRCDQ00LT1 54 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 LGALSLQ3ZCW2 172 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 STX12Q86Y82 276 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 BCL6BQ8N143 479 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 RASL11BQ9BPW5 248 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 ARL6Q9H0F7 186 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
TMEM39A-203ENST00000461654 H3BUX3 64 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 CNIH1O95406 144 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 OPN1MWP04001 364 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 OPN1MW2P0DN77 364 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 OPN1MW3P0DN78 364 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 HKR1P10072 659 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 S100A11P31949 105 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 RPL27AP46776 148 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 DEFB112Q30KQ8 113 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 SPANXN5Q5MJ07 72 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 LAMTOR1Q6IAA8 161 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 KCNRGQ8N5I3 272 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 ZNF48Q96MX3 618 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 C11orf1Q9H5F2 150 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 TPSG1Q9NRR2 321 aa12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 PAIP2BQ9ULR5 123 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-203ENST00000461654 RNF222A6NCQ9 220 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 H3BP45 60 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 HAX1O00165 279 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 KCNAB3O43448 404 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 IFNA10P01566 189 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 SNCAP37840 140 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 PAX9P55771 341 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 BAXQ07812 192 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 PJVKQ0ZLH3 352 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 SLC25A33Q9BSK2 321 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 NDUFA4L2Q9NRX3 87 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 MOB4Q9Y3A3 225 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 U3KQ87 197 aa12.08□□□□□ -0.48
TMEM39A-203ENST00000461654 MSGN1A6NI15 193 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 TAAR5O14804 337 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 TMEM50AO95807 157 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 CA2P00918 260 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 MYOD1P15172 320 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 ATP5IP56385 69 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 RAB11AP62491 216 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 OPCMLQ14982 345 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 HSD17B13Q7Z5P4 300 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 OR5R1Q8NH85 324 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 RBM14Q96PK6 669 aaKnown RBP12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 ARPC5LQ9BPX5 153 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 PLSCR3Q9NRY6 295 aa12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 SOX21Q9Y651 276 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-203ENST00000461654 DNAJC9-AS1A6NH13 148 aa12.06□□□□□ -0.48
TMEM39A-203ENST00000461654 M0QZK8 103 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms