RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 LYL1P12980 280 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 EDN2P20800 178 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 HAGHQ16775 308 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 DEFB114Q30KQ6 69 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 PHLDA2Q53GA4 152 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 FCAMRQ8WWV6 532 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 CACNG8Q8WXS5 425 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 AP3S1Q92572 193 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 LSM10Q969L4 123 aaKnown RBP10.54□□□□□ -0.72
USP4-206ENST00000461553 LYSTQ99698 3801 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 HINT2Q9BX68 163 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 ZC4H2Q9NQZ6 224 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
USP4-206ENST00000461553 TMEM213A2RRL7 107 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 SNAPC5O75971 98 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 KRASP01116 189 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 IFNA6P05013 189 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 OR13C7P0DN81 318 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 G6PCP35575 357 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 LPAR6P43657 344 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 RORCP51449 518 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 ZNF57Q68EA5 555 aaPredicted RBP10.53□□□□□ -0.72
USP4-206ENST00000461553 LPCAT3Q6P1A2 487 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 MZT2AQ6P582 158 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 ZNF502Q8TBZ5 544 aa10.53□□□□□ -0.72
USP4-206ENST00000461553 WDR89Q96FK6 387 aaPredicted RBP10.53□□□□□ -0.72
USP4-206ENST00000461553 FAM25AB3EWG3 89 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 FAM25CB3EWG5 89 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 FAM25GB3EWG6 89 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 HPGDSO60760 199 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 CLEC3BP05452 202 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 SERPINE2P07093 398 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 CD7P09564 240 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 ELK1P19419 428 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 CBLN1P23435 193 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 PTBP1P26599 531 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP4-206ENST00000461553 WT1-ASQ06250 92 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 SLC16A13Q7RTY0 426 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 SLC38A6Q8IZM9 456 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 VN1R17PQ8TDU5 208 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 TMEM56Q96MV1 263 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 TSC22D3Q99576 134 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 FAM212BQ9NTI7 297 aaPredicted RBP10.52□□□□□ -0.73
USP4-206ENST00000461553 PRNDQ9UKY0 176 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 OR51B2Q9Y5P1 312 aa10.52□□□□□ -0.73
USP4-206ENST00000461553 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 C15orf61A6NNL5 157 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 ZNF785A8K8V0 405 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 TGOLN2O43493 480 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 GABARAPO95166 117 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 ZNF585BQ52M93 769 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 RNASE12Q5GAN4 147 aaKnown RBP10.51□□□□□ -0.73
USP4-206ENST00000461553 SLC25A24Q6NUK1 477 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 BTNL8Q6UX41 500 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 TBC1D26Q86UD7 250 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 LYSMD2Q8IV50 215 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 TMEM61Q8N0U2 210 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 CADM3Q8N126 398 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 UXS1Q8NBZ7 420 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 OR5B3Q8NH48 314 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 MARC2Q969Z3 335 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 WFDC10AQ9H1F0 79 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 NDUFA4L2Q9NRX3 87 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 FKBP11Q9NYL4 201 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 MLXQ9UH92 298 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
USP4-206ENST00000461553 F11RQ9Y624 299 aaKnown RBP10.51□□□□□ -0.73
USP4-206ENST00000461553 SMIM18P0DKX4 95 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 ELLP55199 621 aaPredicted RBP10.5□□□□□ -0.73
USP4-206ENST00000461553 UNQ9165/PRO28630Q6UXU0 137 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 OR52B4Q8NGK2 314 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 OR1L6Q8NGR2 347 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 TMEM190Q8WZ59 177 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
USP4-206ENST00000461553 SELENOKQ9Y6D0 94 aa10.5□□□□□ -0.73
USP4-206ENST00000461553 IGHV3-35A0A0C4DH35 117 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 OR2T8A6NH00 312 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 M0QYG6 137 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 SCAF4O95104 1147 aaKnown RBP10.49□□□□□ -0.73
USP4-206ENST00000461553 PGAM2P15259 253 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 UCP3P55916 312 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 RNASE10Q5GAN6 216 aaKnown RBP10.49□□□□□ -0.73
USP4-206ENST00000461553 ZFAND6Q6FIF0 208 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 SPSB3Q6PJ21 355 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
USP4-206ENST00000461553 H2BFWTQ7Z2G1 175 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 UBAC2Q8NBM4 344 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 OR4A16Q8NH70 328 aa10.49□□□□□ -0.73
USP4-206ENST00000461553 ATP6V0BQ99437 205 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms