RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 ZNF773Q6PK81 442 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 CLEC19AQ6UXS0 136 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 SSX9Q7RTT3 188 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 DEFB125Q8N687 156 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 MARC2Q969Z3 335 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 SLC25A38Q96DW6 304 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 CCDC140Q96MF4 163 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 COMMD5Q9GZQ3 224 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 SLC5A7Q9GZV3 580 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 RETNQ9HD89 108 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 THYN1Q9P016 225 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 STARD9Q9P2P6 4700 aa6.54□□□□□ -1.36
HDAC9-220ENST00000461409 IGLV11-55A0A075B6I3 123 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 A0A1B0GW64 132 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 TMEM213A2RRL7 107 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 RBMY1BA6NDE4 496 aaKnown RBP6.53□□□□□ -1.36
HDAC9-220ENST00000461409 RBMY1EA6NEQ0 496 aaKnown RBP6.53□□□□□ -1.36
HDAC9-220ENST00000461409 E7EUB6 86 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 SULT1C2O00338 296 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 HPRT1P00492 218 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 IGHV3-23P01764 117 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 REG1AP05451 166 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 CLEC3BP05452 202 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 RBMY1DP0C7P1 496 aaKnown RBP6.53□□□□□ -1.36
HDAC9-220ENST00000461409 OR2B8PP59922 312 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 HERV-K104P61576 105 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 ERVK-16P61578 105 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 POU2AF1Q16633 256 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 THOC7Q6I9Y2 204 aaKnown RBP6.53□□□□□ -1.36
HDAC9-220ENST00000461409 C19orf35Q6ZS72 473 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 HSD17B13Q7Z5P4 300 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-220ENST00000461409 CROCCP3Q8IVE0 287 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 TMEM61Q8N0U2 210 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 GVQW1Q8N7I0 195 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 UXS1Q8NBZ7 420 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 DMBX1Q8NFW5 382 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 OR5AP2Q8NGF4 316 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 OR52B4Q8NGK2 314 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 GIMAP1Q8WWP7 306 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 FAM110AQ9BQ89 295 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 QTRT1Q9BXR0 403 aaKnown RBP6.53□□□□□ -1.36
HDAC9-220ENST00000461409 AUNIPQ9H7T9 357 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 PLEKHA2Q9HB19 425 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 IFT46Q9NQC8 304 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 CCL28Q9NRJ3 127 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 COMMD9Q9P000 198 aa6.53□□□□□ -1.36
HDAC9-220ENST00000461409 TRAV25A0A0B4J276 109 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 UPK2O00526 184 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 ATP6V1G2O95670 118 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 PTHLHP12272 177 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 MYOD1P15172 320 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 PTBP1P26599 531 aaKnown RBP eCLIP6.52□□□□□ -1.37
HDAC9-220ENST00000461409 ELLP55199 621 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-220ENST00000461409 FXYD4P59646 89 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 AADACL3Q5VUY0 350 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 RBPMS2Q6ZRY4 209 aaKnown RBP6.52□□□□□ -1.37
HDAC9-220ENST00000461409 TMEM17Q86X19 198 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 OR5H6Q8NGV6 325 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 OR51H1Q8NH63 302 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 CACNG8Q8WXS5 425 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 GGTLC1Q9BX51 225 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 GAR1Q9NY12 217 aaKnown RBP6.52□□□□□ -1.37
HDAC9-220ENST00000461409 MLXQ9UH92 298 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 UFC1Q9Y3C8 167 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 S4R3C0 116 aa6.52□□□□□ -1.37
HDAC9-220ENST00000461409 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 LOC102724200A0A096LPH7 203 aaPredicted RBP6.51□□□□□ -1.37
HDAC9-220ENST00000461409 MFSD2BA6NFX1 497 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 CGB1A6NKQ9 187 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 XRCC3O43542 346 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 SCAF4O95104 1147 aaKnown RBP6.51□□□□□ -1.37
HDAC9-220ENST00000461409 PLA2G1BP04054 148 aaKnown RBP6.51□□□□□ -1.37
HDAC9-220ENST00000461409 CLEC2LP0C7M8 214 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 EDN2P20800 178 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 GPR183P32249 361 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 TAS2R46P59540 309 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 NEDD8Q15843 81 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 SPSB3Q6PJ21 355 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 PLET1Q6UQ28 207 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 BTNL8Q6UX41 500 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 ZNF818PQ6ZRF7 136 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 CMTM1Q8IZ96 169 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 GDPD1Q8N9F7 314 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 OR1L6Q8NGR2 347 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 OR1L8Q8NGR8 309 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 ZNF502Q8TBZ5 544 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 S100A16Q96FQ6 103 aaKnown RBP6.51□□□□□ -1.37
HDAC9-220ENST00000461409 RNF167Q9H6Y7 350 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 EHFQ9NZC4 300 aa6.51□□□□□ -1.37
HDAC9-220ENST00000461409 MRPL27Q9P0M9 148 aaKnown RBP6.51□□□□□ -1.37
HDAC9-220ENST00000461409 MARCH11A6NNE9 402 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 S1PR2O95136 353 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 FCER2P06734 321 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 SERPINE2P07093 398 aa6.5□□□□□ -1.37
HDAC9-220ENST00000461409 TRAPPC2P0DI81 140 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms