RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 IGHV3-48P01763 117 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 EGR1P18146 543 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 GPHA2Q96T91 129 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 MS4A6AQ9H2W1 248 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 FBXL15Q9H469 300 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 TRGV11A0A075B6L2 103 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 EFEMP2O95967 443 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 MORN3Q6PF18 240 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-205ENST00000461221 TMEM167AQ8TBQ9 72 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 HBDP02042 147 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 PPBPP02775 128 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 GLRXP35754 106 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 ST6GALNAC3Q8NDV1 305 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 SIGMAR1Q99720 223 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 SRXN1Q9BYN0 137 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 NHP2Q9NX24 153 aaKnown RBP7.61□□□□□ -1.19
BRCA1-205ENST00000461221 LAMTOR2Q9Y2Q5 125 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 CACNA1CQ13936 2221 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 SMAD7O15105 426 aaKnown RBP7.61□□□□□ -1.19
BRCA1-205ENST00000461221 NAPSAO96009 420 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 SRP19P09132 144 aaKnown RBP7.61□□□□□ -1.19
BRCA1-205ENST00000461221 FHITP49789 147 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 S100A7L2Q5SY68 101 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 CLEC19AQ6UXS0 136 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 FAM90A1Q86YD7 464 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 IMMP2LQ96T52 175 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 LAMA4Q16363 1823 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 IGHV3-49A0A0A0MS15 119 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 A0A1W2PQF6 199 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 PVRIGQ6DKI7 326 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 JMJD8Q96S16 334 aa7.61□□□□□ -1.19
BRCA1-205ENST00000461221 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 TFF3Q07654 80 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 LINC01559Q495D7 138 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 Q6ZT83 130 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 TMEM190Q8WZ59 177 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 CHTOPQ9Y3Y2 248 aaKnown RBP7.6□□□□□ -1.19
BRCA1-205ENST00000461221 CD7P09564 240 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 COX6A1P12074 109 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 TRAV2A0A0B4J234 112 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 LGALS1P09382 135 aaKnown RBP7.6□□□□□ -1.19
BRCA1-205ENST00000461221 CD28P10747 220 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 MEGF9Q9H1U4 602 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 PILRBQ9UKJ0 227 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 EGR4Q05215 589 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 PCOLCEQ15113 449 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 ZNF562Q6V9R5 426 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 TM2D1Q9BX74 207 aa7.6□□□□□ -1.19
BRCA1-205ENST00000461221 PRRC2BQ5JSZ5 2229 aaKnown RBP7.59□□□□□ -1.19
BRCA1-205ENST00000461221 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 NDUFS8O00217 210 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 PIN1P1O15428 100 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 FUT5Q11128 374 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 LDLRAD2Q5SZI1 272 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 ZIC4Q8N9L1 334 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 C1orf162Q8NEQ5 155 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-205ENST00000461221 FBLIM1Q8WUP2 373 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 VKORC1Q9BQB6 163 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 IGKV3D-20A0A0C4DH25 116 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 M0R2P5 195 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 ZNHIT1O43257 154 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 TOMM40O96008 361 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 ORAOV1Q8WV07 137 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 CST9LQ9H4G1 147 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 NRN1Q9NPD7 142 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 HS3ST3B1Q9Y662 390 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 TRGV4A0A0C4DH28 118 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 KBTBD11-OT1A0A1B0GTJ5 212 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 PRR19A6NJB7 356 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 ADARB2-AS1A8MUL3 147 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 C12orf77C9JDV5 145 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 VDAC2P45880 294 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-205ENST00000461221 CRYBA2P53672 197 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 COQ2Q96H96 371 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 IGKCP01834 107 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 UCP1P25874 307 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 ATP5G3P48201 142 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 Q5PR19 223 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 FAM89BQ8N5H3 189 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 ZNRF1Q8ND25 227 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 COL22A1Q8NFW1 1626 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-205ENST00000461221 NUP205Q92621 2012 aa7.59□□□□□ -1.19
BRCA1-205ENST00000461221 TRAV9-2A0A087WT02 112 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 MIR17HGQ75NE6 70 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 TMEM170AQ8WVE7 144 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 OVOL2Q9BRP0 275 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 MRPL20Q9BYC9 149 aaKnown RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 SEPSECSQ9HD40 501 aaKnown RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 SMPXQ9UHP9 88 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 DOCK2Q92608 1830 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 F8WEM9 126 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 SRSF4Q08170 494 aaKnown RBP7.58□□□□□ -1.2
BRCA1-205ENST00000461221 FBLN7Q53RD9 439 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 CDCP2Q5VXM1 449 aa7.58□□□□□ -1.2
BRCA1-205ENST00000461221 FAM168AQ92567 244 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms