RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 MAP1LC3B2A6NCE7 125 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 GGTLC3B5MD39 225 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 E7EQ34 232 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 RPL36A-HNRNPH2H7BZ11 118 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 NPYP01303 97 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 LGALS1P09382 135 aaKnown RBP2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 UCHL1P09936 223 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 INAFM2P0DMQ5 153 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 CYBAP13498 195 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 CBR1P16152 277 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 FOXA1P55317 472 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 RBM11P57052 281 aaKnown RBP2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF117Q03924 483 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 DHRS2Q13268 280 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 EIF4EBP1Q13541 118 aaPredicted RBP2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 EBI3Q14213 229 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 ADM2Q7Z4H4 148 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 HMGN2P46Q86SG4 172 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 PHF13Q86YI8 300 aaPredicted RBP2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 PACRGLQ8N7B6 248 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 CNEP1R1Q8N9A8 125 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 ERMAPQ96PL5 475 aaPredicted RBP2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 MAP1LC3BQ9GZQ8 125 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 PBOV1Q9GZY1 135 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 IL36BQ9NZH7 164 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 FUT9Q9Y231 359 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 FHAD1B1AJZ9 1412 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 CRB1P82279 1406 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 SSH2Q76I76 1423 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 SYNMO15061 1565 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 CEP170Q5SW79 1584 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 NUP205Q92621 2012 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 ZCCHC6Q5VYS8 1495 aaKnown RBP2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 NACAE9PAV3 2078 aa2.13□□□□□ -2.07
SPTLC1-203ENST00000461132 OTOFQ9HC10 1997 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 TRBV19A0A075B6N1 114 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 IGKV1D-37A0A075B6S9 117 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 IRGMA1A4Y4 181 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 TMEM235A6NFC5 223 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 GGT3PA6NGU5 568 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 FABP5P3A8MUU1 101 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 H3BPC8 53 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ORC5O43913 435 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 OR2J2O76002 312 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 C1QAP02745 245 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 C1QBP02746 253 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 GZMBP10144 247 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 G6PCP35575 357 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 RPS11P62280 158 aaKnown RBP eCLIP2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 RPL18Q07020 188 aaKnown RBP2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 HTR4Q13639 388 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF141Q15928 474 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 MIAQ16674 131 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 LGALS9BQ3B8N2 356 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 SPANXN3Q5MJ09 141 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 KPRPQ5T749 579 aaPredicted RBP2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 AADACL3Q5VUY0 350 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 AMMECR1LQ6DCA0 310 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 LGALS9CQ6DKI2 356 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF705AQ6ZN79 300 aaPredicted RBP2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 SPATA12Q7Z6I5 190 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 TRAPPC6BQ86SZ2 158 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF283Q8N7M2 679 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF709Q8N972 641 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 OR10P1Q8NGE3 313 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 OR10K1Q8NGX5 313 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 MUC7Q8TAX7 377 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 MBD3L1Q8WWY6 194 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 UPK3BQ9BT76 320 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 CHST6Q9GZX3 395 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 SLC39A9Q9NUM3 307 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 SS18L2Q9UHA2 77 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 CYSLTR1Q9Y271 337 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF443Q9Y2A4 671 aaPredicted RBP2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 SLC35A3Q9Y2D2 325 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF835Q9Y2P0 537 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 NDUFAF1Q9Y375 327 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 THADAQ6YHU6 1953 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 ITGB4P16144 1822 aa2.12□□□□□ -2.07
SPTLC1-203ENST00000461132 MIA2Q96PC5 1412 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 YEATS2Q9ULM3 1422 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 RIIAD1A6NNX1 92 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 COLCA2A8K830 154 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 BANF1O75531 89 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 PIAS1O75925 651 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 CCL3P10147 92 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 RPS4Y1P22090 263 aaKnown RBP2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 CD24P25063 80 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 S100A12P80511 92 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 MEF2BQ02080 365 aaPredicted RBP2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF767PQ75MW2 155 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 CLVS1Q8IUQ0 354 aaPredicted RBP2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 TMEM35BQ8NCS4 154 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 GRPEL2Q8TAA5 225 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 ZNF675Q8TD23 568 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 SMCR5Q8TEV8 140 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 OR8B2Q96RD0 313 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 LYSMD1Q96S90 227 aa2.11□□□□□ -2.07
SPTLC1-203ENST00000461132 CCDC32Q9BV29 185 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms