RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 IGKV1-33P01594 117 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 IGHV2-5P01817 119 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 SFTA3P0C7M3 94 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 MAS1LP35410 378 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 OPRK1P41145 380 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 RAB2AP61019 212 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 KHDC3LQ587J8 217 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 SPINK9Q5DT21 86 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 ACSM6Q6P461 480 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 ATRAIDQ6UW56 229 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 RPP25LQ8N5L8 163 aaKnown RBP8.76□□□□□ -1.01
IFT88-204ENST00000461115 NARS2Q96I59 477 aaKnown RBP8.76□□□□□ -1.01
IFT88-204ENST00000461115 TMEM231Q9H6L2 316 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 VSIRQ9H7M9 311 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 PLEKHA3Q9HB20 300 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 NPVFQ9HCQ7 196 aa8.76□□□□□ -1.01
IFT88-204ENST00000461115 NAV3Q8IVL0 2385 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 CTXND1A0A1B0GTU2 59 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 A0A1W2PN81 502 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 A0A1W2PPI3 338 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 AGPAT2O15120 278 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 CA2P00918 260 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 HSPB1P04792 205 aaKnown RBP8.75□□□□□ -1.01
IFT88-204ENST00000461115 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
IFT88-204ENST00000461115 FGF7P21781 194 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 CHRNA7P36544 502 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 CDKN1AP38936 164 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 REG1BP48304 166 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 GUCA2BQ16661 112 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 VMA21Q3ZAQ7 101 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 CLDND2Q8NHS1 167 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 NKX6-2Q9C056 277 aaPredicted RBP8.75□□□□□ -1.01
IFT88-204ENST00000461115 SLC35B3Q9H1N7 401 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 UBTD1Q9HAC8 227 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 ENY2Q9NPA8 101 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 WNK2Q9Y3S1 2297 aa8.75□□□□□ -1.01
IFT88-204ENST00000461115 USP9XQ93008 2570 aaPredicted RBP8.75□□□□□ -1.01
IFT88-204ENST00000461115 LOC102723971A0A1B0GUV8 181 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 OOSP1A8MZH6 123 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 DNASE2O00115 360 aaPredicted RBP8.74□□□□□ -1.01
IFT88-204ENST00000461115 SNAPINO95295 136 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 LMO4P61968 165 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 RPS16P62249 146 aaKnown RBP8.74□□□□□ -1.01
IFT88-204ENST00000461115 LDLRAD2Q5SZI1 272 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 TPTE2P1Q5T6R2 138 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 SSX7Q7RTT5 188 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 ZNF114Q8NC26 417 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 SFT2D1Q8WV19 159 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 CACNG8Q8WXS5 425 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 COMMD5Q9GZQ3 224 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 KCNIP2Q9NS61 270 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 DPM3Q9P2X0 92 aa8.74□□□□□ -1.01
IFT88-204ENST00000461115 SPTAN1Q13813 2472 aaKnown RBP8.74□□□□□ -1.01
IFT88-204ENST00000461115 AKAP6Q13023 2319 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 ENSAO43768 121 aaKnown RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 NDUFS7O75251 213 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 SRP19P09132 144 aaKnown RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 MYOD1P15172 320 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 HTR1DP28221 377 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 GPX4P36969 197 aaPredicted RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 TAGLN2P37802 199 aaKnown RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 RPL29P47914 159 aaKnown RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 DEFA5Q01523 94 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 ICAM4Q14773 271 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 PSG5Q15238 335 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 PRSS8Q16651 343 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 TMEM144Q7Z5S9 345 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 MMD2Q8IY49 270 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 ZNF709Q8N972 641 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 CFHR4Q92496 578 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 P2RX4Q99571 388 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 MGST2Q99735 147 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 SRSF8Q9BRL6 282 aaKnown RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 EIF5A2Q9GZV4 153 aaKnown RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 SIRPDQ9H106 197 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 ZNF430Q9H8G1 570 aaPredicted RBP8.73□□□□□ -1.01
IFT88-204ENST00000461115 INSIG2Q9Y5U4 225 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 DCHS2Q6V1P9 2916 aa8.73□□□□□ -1.01
IFT88-204ENST00000461115 E7EUB6 86 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 CYB5BO43169 146 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 YIF1AO95070 293 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 IFNA4P05014 189 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 PAX1P15863 534 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 ZFP36P26651 326 aaKnown RBP8.72□□□□□ -1.01
IFT88-204ENST00000461115 CEACAM3P40198 252 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 ARF6P62330 175 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 WT1-ASQ06250 92 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 ACOT6Q3I5F7 207 aaPredicted RBP8.72□□□□□ -1.01
IFT88-204ENST00000461115 MINOS1Q5TGZ0 78 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 TEPPQ6URK8 271 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 PNKDQ8N490 385 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 CLRN3Q8NCR9 226 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 NPBQ8NG41 125 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 RNASEH2CQ8TDP1 164 aaKnown RBP8.72□□□□□ -1.01
IFT88-204ENST00000461115 RPEQ96AT9 228 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 RITA1Q96K30 269 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 BBC3Q96PG8 261 aaPredicted RBP8.72□□□□□ -1.01
IFT88-204ENST00000461115 GGTLC1Q9BX51 225 aa8.72□□□□□ -1.01
IFT88-204ENST00000461115 ACTR3CQ9C0K3 210 aaPredicted RBP8.72□□□□□ -1.01
IFT88-204ENST00000461115 ONECUT1Q9UBC0 465 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms