RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 AMTNQ6UX39 209 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 GPHB5Q86YW7 130 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 SLC22A24Q8N4F4 322 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 OR2D3Q8NGH3 330 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 OR51A2Q8NGJ7 313 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 OR11H2Q8NH07 326 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 SGMS2Q8NHU3 365 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 ZNF625Q96I27 306 aaPredicted RBP1.69□□□□□ -2.14
VBP1-202ENST00000460509 Q9BRP9 147 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 KIFC1Q9BW19 673 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 CENPHQ9H3R5 247 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 CXorf21Q9HAI6 301 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 MRPL40Q9NQ50 206 aaKnown RBP1.69□□□□□ -2.14
VBP1-202ENST00000460509 C14orf105Q9NVL8 296 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 RPL26L1Q9UNX3 145 aaKnown RBP1.69□□□□□ -2.14
VBP1-202ENST00000460509 FAM32AQ9Y421 112 aaKnown RBP1.69□□□□□ -2.14
VBP1-202ENST00000460509 MUC6Q6W4X9 2439 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 HECW1Q76N89 1606 aa1.69□□□□□ -2.14
VBP1-202ENST00000460509 ARRDC5A6NEK1 342 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 TMEM235A6NFC5 223 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 SIGLEC16A6NMB1 481 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 C9JCJ5 164 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 SLC17A3O00476 420 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 GNRH2O43555 120 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 PDE6DO43924 150 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 HLA-DRB1P01911 266 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 KCNE1P15382 129 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 CRYBA4P53673 196 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 FKBP1AP62942 108 aaKnown RBP1.68□□□□□ -2.14
VBP1-202ENST00000460509 CAV1Q03135 178 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 FABP9Q0Z7S8 132 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 TNFAIP8L3Q5GJ75 292 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 C9orf64Q5T6V5 341 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 OOSP2Q86WS3 158 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 TMEM147Q9BVK8 224 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 NKX6-2Q9C056 277 aaPredicted RBP1.68□□□□□ -2.14
VBP1-202ENST00000460509 RNASE7Q9H1E1 156 aaKnown RBP1.68□□□□□ -2.14
VBP1-202ENST00000460509 ENY2Q9NPA8 101 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 OPTCQ9UBM4 332 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 GBF1Q92538 1859 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 ABCC12Q96J65 1359 aa1.68□□□□□ -2.14
VBP1-202ENST00000460509 IGLV3-9A0A075B6K5 115 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 IGHV3-15A0A0B4J1V0 119 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 MDFIC2A0A1B0GVS7 189 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 H3BQV1 296 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 IFNA1P01562 189 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 C1QBP02746 253 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 RPSAP08865 295 aaKnown RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 CCL3P10147 92 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 RPS20P60866 119 aaKnown RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 HSPE1P61604 102 aaKnown RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 TBPL1P62380 186 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 GNG3P63215 75 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 C12orf74Q32Q52 190 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 Q6ZS49 121 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 C12orf45Q8N5I9 185 aaPredicted RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 ZNF283Q8N7M2 679 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 GDPD1Q8N9F7 314 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 MCFD2Q8NI22 146 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 RPS4Y2Q8TD47 263 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 RAB2BQ8WUD1 216 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 ROPN1LQ96C74 230 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 ERMAPQ96PL5 475 aaPredicted RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 BOLA2Q9H3K6 86 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 GPR84Q9NQS5 396 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 PRTFDC1Q9NRG1 225 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 RSL24D1Q9UHA3 163 aaKnown RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 AK3Q9UIJ7 227 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 DICER1Q9UPY3 1922 aaKnown RBP1.67□□□□□ -2.14
VBP1-202ENST00000460509 DSCAML1Q8TD84 2053 aa1.67□□□□□ -2.14
VBP1-202ENST00000460509 DOCK10Q96BY6 2186 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 RTEL1-TNFRSF6BF6WH68 1400 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 A0A087WUU8 490 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 A0A0J9YY10 115 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 A0A1B0GVG6 124 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 A0A1B0GX78 115 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 PLA2G10O15496 165 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 ATG12O94817 140 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 ZNF682O95780 498 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 IGHV1-69P01742 117 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 SERPINA7P05543 415 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 TAS2R41P59536 307 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 ERHP84090 104 aaKnown RBP1.66□□□□□ -2.14
VBP1-202ENST00000460509 KCNJ8Q15842 424 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 TRIQKQ629K1 86 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 SMIM15Q7Z3B0 74 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 TAC4Q86UU9 113 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 SMIM20Q8N5G0 67 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 CNEP1R1Q8N9A8 125 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 OR13C8Q8NGS7 320 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 MRPL30Q8TCC3 161 aaKnown RBP1.66□□□□□ -2.14
VBP1-202ENST00000460509 GINS3Q9BRX5 216 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 ULBP3Q9BZM4 244 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 PCBD2Q9H0N5 130 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 RTL1A6NKG5 1358 aa1.66□□□□□ -2.14
VBP1-202ENST00000460509 A0A1B0GV72 72 aa1.65□□□□□ -2.15
VBP1-202ENST00000460509 GNG14A0A1W2PPG7 69 aa1.65□□□□□ -2.15
VBP1-202ENST00000460509 RFPL4AA6NLU0 287 aa1.65□□□□□ -2.15
VBP1-202ENST00000460509 RFPL4AL1F8VTS6 287 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms