RNA–Protein interactions for RNA: ENST00000460297.1

NME4-209, Transcript of NME/NM23 nucleoside diphosphate kinase 4, humanhuman

TSL 5

Gene NME4, Length 1,652 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME4-209ENST00000460297 VDAC2P45880 294 aaPredicted RBP19.24■□□□□ 0.67
NME4-209ENST00000460297 OR10W1Q8NGF6 305 aa19.24■□□□□ 0.67
NME4-209ENST00000460297 SSMEM1Q8WWF3 244 aa19.24■□□□□ 0.67
NME4-209ENST00000460297 RASL11BQ9BPW5 248 aa19.24■□□□□ 0.67
NME4-209ENST00000460297 FGF16O43320 207 aa19.23■□□□□ 0.67
NME4-209ENST00000460297 HLA-DRB1P01911 266 aa19.23■□□□□ 0.67
NME4-209ENST00000460297 PVALBP20472 110 aaPredicted RBP19.23■□□□□ 0.67
NME4-209ENST00000460297 SMIM8Q96KF7 97 aa19.23■□□□□ 0.67
NME4-209ENST00000460297 TNFRSF19Q9NS68 423 aa19.23■□□□□ 0.67
NME4-209ENST00000460297 WSB1Q9Y6I7 421 aa19.23■□□□□ 0.67
NME4-209ENST00000460297 NSD1Q96L73 2696 aaPredicted RBP19.23■□□□□ 0.67
NME4-209ENST00000460297 MSGN1A6NI15 193 aa19.22■□□□□ 0.67
NME4-209ENST00000460297 L7N2F9 121 aa19.22■□□□□ 0.67
NME4-209ENST00000460297 RPL27AP46776 148 aaKnown RBP19.22■□□□□ 0.67
NME4-209ENST00000460297 HOXA1P49639 335 aaPredicted RBP19.22■□□□□ 0.67
NME4-209ENST00000460297 VAMP2P63027 116 aa19.22■□□□□ 0.67
NME4-209ENST00000460297 CX3CL1P78423 397 aa19.22■□□□□ 0.67
NME4-209ENST00000460297 ZNF562Q6V9R5 426 aa19.22■□□□□ 0.67
NME4-209ENST00000460297 SRSF12Q8WXF0 261 aaKnown RBP19.22■□□□□ 0.67
NME4-209ENST00000460297 F8P00451 2351 aa19.22■□□□□ 0.67
NME4-209ENST00000460297 RNF222A6NCQ9 220 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 SH2D7A6NKC9 451 aaPredicted RBP19.21■□□□□ 0.67
NME4-209ENST00000460297 H3BP45 60 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 P2RY1P47900 373 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 HSPB9Q9BQS6 159 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 PLEKHA3Q9HB20 300 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 CDC42EP3Q9UKI2 254 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 VPREB3Q9UKI3 123 aa19.21■□□□□ 0.67
NME4-209ENST00000460297 IGHV7-81A0A0B4J1V7 117 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 CNIH1O95406 144 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 CXCL2P19875 107 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 TAS2R30P59541 319 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 NDPQ00604 133 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 FXYD3Q14802 87 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 LAMTOR1Q6IAA8 161 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 C16orf82Q7Z2V1 217 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 OR2C3Q8N628 320 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 HEYLQ9NQ87 328 aaPredicted RBP19.2■□□□□ 0.66
NME4-209ENST00000460297 LYRM2Q9NU23 88 aaPredicted RBP19.2■□□□□ 0.66
NME4-209ENST00000460297 PSENENQ9NZ42 101 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 BTBD17A6NE02 478 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 FAM24AA6NFZ4 105 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 CAV2P51636 162 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 RPL23AP62750 156 aaKnown RBP19.2■□□□□ 0.66
NME4-209ENST00000460297 LGALSLQ3ZCW2 172 aaPredicted RBP19.2■□□□□ 0.66
NME4-209ENST00000460297 C9orf62Q8N4C0 152 aa19.2■□□□□ 0.66
NME4-209ENST00000460297 CIB3Q96Q77 187 aaPredicted RBP19.2■□□□□ 0.66
NME4-209ENST00000460297 TEX22C9J3V5 150 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 INAFM1C9JVW0 142 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 HKR1P10072 659 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 SRD5A1P18405 259 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 WT1-ASQ06250 92 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 MFFQ9GZY8 342 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 HIPK2Q9H2X6 1198 aa19.19■□□□□ 0.66
NME4-209ENST00000460297 IGLC7A0M8Q6 106 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 GPR137BO60478 399 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 TSC22D2O75157 780 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 RPL12P30050 165 aaKnown RBP19.18■□□□□ 0.66
NME4-209ENST00000460297 SPANXN5Q5MJ07 72 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 INO80EQ8NBZ0 244 aaPredicted RBP19.18■□□□□ 0.66
NME4-209ENST00000460297 AQP10Q96PS8 301 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 FAM103A1Q9BTL3 118 aaKnown RBP19.18■□□□□ 0.66
NME4-209ENST00000460297 ENY2Q9NPA8 101 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 CUBNO60494 3623 aa19.18■□□□□ 0.66
NME4-209ENST00000460297 IGSF23A1L1A6 192 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 INS-IGF2F8WCM5 200 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 M0QZK8 103 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 APELAP0DMC3 54 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 AP2S1P53680 142 aaPredicted RBP19.17■□□□□ 0.66
NME4-209ENST00000460297 ACOT7LQ6ZUV0 252 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 TMEM252Q8N6L7 170 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 ARPC1AQ92747 370 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 DUX5Q96PT3 197 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 OR4C12Q96R67 309 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 FBXO7Q9Y3I1 522 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 A0A1W2PN81 502 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 CHRNA7P36544 502 aa19.17■□□□□ 0.66
NME4-209ENST00000460297 LINC01548A6NM66 108 aa19.16■□□□□ 0.66
NME4-209ENST00000460297 LY86O95711 162 aa19.16■□□□□ 0.66
NME4-209ENST00000460297 EGR2P11161 476 aaPredicted RBP19.16■□□□□ 0.66
NME4-209ENST00000460297 AREGP15514 252 aa19.16■□□□□ 0.66
NME4-209ENST00000460297 BLCAPP62952 87 aa19.16■□□□□ 0.66
NME4-209ENST00000460297 SCGB2A2Q13296 93 aa19.16■□□□□ 0.66
NME4-209ENST00000460297 RBMS3Q6XE24 437 aaKnown RBP19.16■□□□□ 0.66
NME4-209ENST00000460297 TMEM170AQ8WVE7 144 aa19.16■□□□□ 0.66
NME4-209ENST00000460297 C15orf62A8K5M9 175 aa19.15■□□□□ 0.66
NME4-209ENST00000460297 OR13C7P0DN81 318 aa19.15■□□□□ 0.66
NME4-209ENST00000460297 TMEM267Q0VDI3 215 aaPredicted RBP19.15■□□□□ 0.66
NME4-209ENST00000460297 TMEM14EPQ6UXP3 125 aa19.15■□□□□ 0.66
NME4-209ENST00000460297 BOLA1Q9Y3E2 137 aa19.15■□□□□ 0.66
NME4-209ENST00000460297 HSPB11Q9Y547 144 aa19.15■□□□□ 0.66
NME4-209ENST00000460297 U3KQ87 197 aa19.15■□□□□ 0.66
NME4-209ENST00000460297 IFNA10P01566 189 aa19.14■□□□□ 0.66
NME4-209ENST00000460297 REG1AP05451 166 aa19.14■□□□□ 0.66
NME4-209ENST00000460297 NUP62P37198 522 aaPredicted RBP19.14■□□□□ 0.66
NME4-209ENST00000460297 EWSR1Q01844 656 aaKnown RBP eCLIP19.14■□□□□ 0.662e-8■■■■□ 26.5
NME4-209ENST00000460297 NHLH2Q02577 135 aa19.14■□□□□ 0.66
NME4-209ENST00000460297 ZNF345Q14585 488 aa19.14■□□□□ 0.66
NME4-209ENST00000460297 BSXQ3C1V8 233 aa19.14■□□□□ 0.66
NME4-209ENST00000460297 Q6ZS46 218 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms