RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 SEC22AQ96IW7 307 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 OR4C12Q96R67 309 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 TSC22D3Q99576 134 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 NDUFA4L2Q9NRX3 87 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 FKBP11Q9NYL4 201 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 FBXL7Q9UJT9 491 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 DMRT1Q9Y5R6 373 aa14.15□□□□□ -0.14
HOXD3-204ENST00000459979 IGLV11-55A0A075B6I3 123 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 SNAPC5O75971 98 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 IGKV1-39P01597 117 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 IGKV1D-39P04432 117 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 TRAPPC2P0DI81 140 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 TRAPPC2BP0DI82 140 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 PGAM2P15259 253 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 PIGPP57054 158 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 TATDN3Q17R31 274 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 C19orf35Q6ZS72 473 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 OR9G4Q8NGQ1 327 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 OR6Q1Q8NGQ2 317 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 OR5B3Q8NH48 314 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 MRGPRFQ96AM1 343 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 TMEM14BQ9NUH8 114 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 SIGLEC8Q9NYZ4 499 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 PRNDQ9UKY0 176 aa14.14□□□□□ -0.15
HOXD3-204ENST00000459979 FABP12A6NFH5 140 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 H0Y980 276 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 BMPR1BO00238 502 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 NDUFB8O95169 186 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 AKAIN1P0CW23 69 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 SURF2Q15527 256 aaPredicted RBP14.13□□□□□ -0.15
HOXD3-204ENST00000459979 RPEL1Q2QD12 228 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 IL34Q6ZMJ4 242 aa14.13□□□□□ -0.15
HOXD3-204ENST00000459979 ANKRD20A5PA0PJZ0 165 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 C15orf61A6NNL5 157 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 DISC1C4P0D8 188 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 B3GALNT1O75752 331 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 IGLV1-51P01701 117 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 REG1AP05451 166 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 SERPINE2P07093 398 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 CTSDP07339 412 aaPredicted RBP14.12□□□□□ -0.15
HOXD3-204ENST00000459979 DEFA4P12838 97 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 PI3P19957 117 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 SYNJ2BPP57105 145 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 WT1-ASQ06250 92 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 GDPD1Q8N9F7 314 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 OR10W1Q8NGF6 305 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 OR13C8Q8NGS7 320 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 LSM10Q969L4 123 aaKnown RBP14.12□□□□□ -0.15
HOXD3-204ENST00000459979 OR51B2Q9Y5P1 312 aa14.12□□□□□ -0.15
HOXD3-204ENST00000459979 CCDC160A6NGH7 325 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 PPP5CP53041 499 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 SCGB2B2Q4G0G5 96 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 H2BFWTQ7Z2G1 175 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 CCDC71LQ8N9Z2 235 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 OR4C16Q8NGL9 310 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 MARCH1Q8TCQ1 289 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 CXorf58Q96LI9 332 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 SLC2A8Q9NY64 477 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 THYN1Q9P016 225 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 COPZ2Q9P299 210 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 NSG2Q9Y328 171 aa14.11□□□□□ -0.15
HOXD3-204ENST00000459979 TRBV7-1A0A0A6YYK4 115 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 C3orf85A0A1B0GTC6 90 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 CYB5BO43169 146 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 OR13C7P0DN81 318 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 SPNP16150 400 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 FAAP20Q6NZ36 180 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 EEF1AKMT3Q96AZ1 226 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 CCDC140Q96MF4 163 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 TMEM56Q96MV1 263 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 TP53RKQ96S44 253 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 PRRT1Q99946 306 aa14.1□□□□□ -0.15
HOXD3-204ENST00000459979 DBX1A6NMT0 343 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 GGCTO75223 188 aaKnown RBP14.09□□□□□ -0.15
HOXD3-204ENST00000459979 LY86O95711 162 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 CSN3P07498 182 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 P0C879 139 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 UCP1P25874 307 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 GPHB5Q86YW7 130 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 RTBDNQ9BSG5 229 aaPredicted RBP14.09□□□□□ -0.15
HOXD3-204ENST00000459979 PEMTQ9UBM1 199 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 GPR132Q9UNW8 380 aa14.09□□□□□ -0.15
HOXD3-204ENST00000459979 LGALS9O00182 355 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 ATG12O94817 140 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 MECP2P51608 486 aaKnown RBP14.08□□□□□ -0.16
HOXD3-204ENST00000459979 OR1L6Q8NGR2 347 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 OR4A16Q8NH70 328 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 VN1R17PQ8TDU5 208 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 ATP6V0BQ99437 205 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 THAP7Q9BT49 309 aaPredicted RBP14.08□□□□□ -0.16
HOXD3-204ENST00000459979 C5orf66Q9H5L9 145 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 F11RQ9Y624 299 aaKnown RBP14.08□□□□□ -0.16
HOXD3-204ENST00000459979 V9GYH0 126 aa14.08□□□□□ -0.16
HOXD3-204ENST00000459979 MFSD2BA6NFX1 497 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 PPP5D1E7EU14 171 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 C3orf84H3BNL1 204 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 IGKV1-5P01602 117 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 GP9P14770 177 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 S100A5P33763 92 aa14.07□□□□□ -0.16
HOXD3-204ENST00000459979 HSPE1P61604 102 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms