RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 NEUROG1Q92886 237 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 RNF2Q99496 336 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 MGST2Q99735 147 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 ELOVL1Q9BW60 279 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM234AQ9H0X4 552 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 MS4A5Q9H3V2 200 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 HEYLQ9NQ87 328 aaPredicted RBP5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TMEM14BQ9NUH8 114 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 FKBP11Q9NYL4 201 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TCF19Q9Y242 345 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 IGKV1D-17A0A075B6S4 117 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 M0R1X1 148 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 RRHO14718 337 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 HMGB3O15347 200 aaKnown RBP5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 ST8SIA5O15466 376 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 FCGR3BO75015 233 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 LYZL6O75951 148 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 REG1AP05451 166 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM87AP0C7U9 286 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 ARL14EPLP0DKL9 152 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 NPY1RP25929 384 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 SSTR5P35346 364 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 CHRNA7P36544 502 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 ATP5G3P48201 142 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 LGALS4P56470 323 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 EDDM3BP56851 147 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 TPPP2P59282 170 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 EFNB3Q15768 340 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 WDR73Q6P4I2 378 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM180AQ6UWF9 173 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 PQLC2Q6ZP29 291 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 NECAP1Q8NC96 275 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 OCC1Q8TAD7 63 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 SDSLQ96GA7 329 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 MEGF10Q96KG7 1140 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 TRIB1Q96RU8 372 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 C20orf144Q9BQM9 153 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 GNB1LQ9BYB4 327 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 IFI27L2Q9H2X8 130 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 PRO1933Q9H354 126 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 ENY2Q9NPA8 101 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF71Q9NQZ8 489 aaPredicted RBP5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 OSTCQ9NRP0 149 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 TMEM106BQ9NUM4 274 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 TMEM140Q9NV12 185 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 GNG12Q9UBI6 72 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 PRNDQ9UKY0 176 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 SLC45A2Q9UMX9 530 aa5.05□□□□□ -1.6
UBQLN4-202ENST00000459954 CFAP46Q8IYW2 2715 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TNCP24821 2201 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TRBV20OR9-2A0A075B6H5 130 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 IGLV3-9A0A075B6K5 115 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TRAV38-1A0A0B4J264 116 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 IGHV1-18A0A0C4DH31 117 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 KBTBD11-OT1A0A1B0GTJ5 212 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 A0A1W2PRE2 83 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MBD3L4A6NDZ8 208 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MBD3L3A6NE82 208 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MBD3L5A6NJ08 208 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF705GA8MUZ8 300 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 C3orf80F5H4A9 247 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MMP23AO75900 390 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 CGAP01215 116 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 LINC00869P0C866 280 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 RD3LP0DJH9 198 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 GLRXP35754 106 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TAS2R45P59539 299 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 NUTF2P61970 127 aaKnown RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 PRCDQ00LT1 54 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 SRSF6Q13247 344 aaKnown RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 RPEL1Q2QD12 228 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 C2orf83Q53S99 150 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TIMM23BQ5SRD1 257 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 RASL11AQ6T310 242 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 C1orf122Q6ZSJ8 110 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 BHLHA15Q7RTS1 189 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MRPL41Q8IXM3 137 aaKnown RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 GCNT2Q8N0V5 402 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 SLC24A4Q8NFF2 622 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 OR1L8Q8NGR8 309 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MBD3L2Q8NHZ7 208 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 Q8TCH9 128 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 CACNG8Q8WXS5 425 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TMEM190Q8WZ59 177 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 EAF1Q96JC9 268 aaPredicted RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 RHOVQ96L33 236 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 MRPL32Q9BYC8 188 aaKnown RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 BET1LQ9NYM9 111 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 CALYQ9NYX4 217 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 TECRQ9NZ01 308 aaKnown RBP5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 IL19Q9UHD0 177 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 NAGKQ9UJ70 344 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 SH3BGRL2Q9UJC5 107 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 PROCRQ9UNN8 238 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 SLC25A15Q9Y619 301 aa5.04□□□□□ -1.6
UBQLN4-202ENST00000459954 IGHV3-43A0A0B4J1X8 118 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 A0A1B0GV90 55 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 SCO2A0A1W2PP80 73 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms