RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR5AC1P0C628 307 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 ZNF616Q08AN1 781 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 SLC35G3Q8N808 338 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 MRGPRFQ96AM1 343 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 PLEKHA3Q9HB20 300 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 RANGRFQ9HD47 186 aaPredicted RBP8.34□□□□□ -1.07
UBR4-208ENST00000459947 A0A1W2PRX2 142 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 CORTO00230 105 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 SLC25A6P12236 298 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 SSBP2P81877 361 aaPredicted RBP8.34□□□□□ -1.07
UBR4-208ENST00000459947 FAAP20Q6NZ36 180 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 VKORC1L1Q8N0U8 176 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 TP53RKQ96S44 253 aa8.34□□□□□ -1.07
UBR4-208ENST00000459947 FAM103A1Q9BTL3 118 aaKnown RBP8.34□□□□□ -1.07
UBR4-208ENST00000459947 TEX22C9J3V5 150 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 LINC01619G3V211 115 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 LYRM1O43325 122 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 DEFA4P12838 97 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 CCR6P51684 374 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 PRCDQ00LT1 54 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 LRTM2Q8N967 370 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 OR5T1Q8NG75 326 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 OR1N2Q8NGR9 330 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 COQ8AQ8NI60 647 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 EEF1AKMT3Q96AZ1 226 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 COL6A5A8TX70 2615 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 CTRB1P17538 263 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 PI3P19957 117 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 TMEM187Q14656 261 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 BAK1Q16611 211 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 CTRB2Q6GPI1 263 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 ZNF114Q8NC26 417 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 VN1R17PQ8TDU5 208 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 GPHA2Q96T91 129 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 P2RX4Q99571 388 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 ALX4Q9H161 411 aaPredicted RBP8.33□□□□□ -1.08
UBR4-208ENST00000459947 TEX50A0A1B0GTY4 177 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 SFT2D2O95562 160 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 INSL3P51460 131 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 SPCS3P61009 180 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 AARDQ4LEZ3 155 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 SELENOHQ8IZQ5 122 aaKnown RBP8.33□□□□□ -1.08
UBR4-208ENST00000459947 TMED3Q9Y3Q3 217 aa8.33□□□□□ -1.08
UBR4-208ENST00000459947 TRBV9A0A0B4J1U6 114 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 P0C879 139 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 SULT1A3P0DMM9 295 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 SULT1A4P0DMN0 295 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 AKR1C4P17516 323 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 ASPHD1Q5U4P2 390 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 TMEM268Q5VZI3 342 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 TRBV7-1A0A0A6YYK4 115 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 MED6O75586 246 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 ASAH1Q13510 395 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 FHL3Q13643 280 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 C10orf99Q6UWK7 81 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 LCNL1Q6ZST4 164 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 TMED4Q7Z7H5 227 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 LINC00482Q8N8I6 264 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 GLYATL2Q8WU03 294 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 SDHCQ99643 169 aaPredicted RBP8.32□□□□□ -1.08
UBR4-208ENST00000459947 ELOVL1Q9BW60 279 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 A0A1B0GU03 582 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 I3L521 148 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 RHOGP84095 191 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 ZNF343Q6P1L6 599 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 C8orf86Q6ZUL3 223 aa8.32□□□□□ -1.08
UBR4-208ENST00000459947 SOX15O60248 233 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 IFNA21P01568 189 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 IGKV1-39P01597 117 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 IGKV1D-39P04432 117 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 EXOSC2Q13868 293 aaKnown RBP8.31□□□□□ -1.08
UBR4-208ENST00000459947 KIAA0141Q14154 515 aaPredicted RBP8.31□□□□□ -1.08
UBR4-208ENST00000459947 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 OR1P1Q8NH06 330 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 IGLC7A0M8Q6 106 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 PDLIM3Q53GG5 364 aaPredicted RBP8.31□□□□□ -1.08
UBR4-208ENST00000459947 REC114Q7Z4M0 266 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 OR2C3Q8N628 320 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 HINT2Q9BX68 163 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 PEF1Q9UBV8 284 aaKnown RBP8.31□□□□□ -1.08
UBR4-208ENST00000459947 F11RQ9Y624 299 aaKnown RBP8.31□□□□□ -1.08
UBR4-208ENST00000459947 UPK1BO75841 260 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 IFNA17P01571 189 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 OR13C7P0DN81 318 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 VAMP1P23763 118 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 C10orf55Q5SWW7 151 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 FBXL7Q9UJT9 491 aa8.31□□□□□ -1.08
UBR4-208ENST00000459947 IGKV1-5P01602 117 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 SNCAP37840 140 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 HOXA1P49639 335 aaPredicted RBP8.3□□□□□ -1.08
UBR4-208ENST00000459947 SMCO1Q147U7 214 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 MS4A10Q96PG2 267 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 TXN2Q99757 166 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 KLK15Q9H2R5 256 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 GNB4Q9HAV0 340 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
UBR4-208ENST00000459947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms