RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 RPL35AP18077 110 aaKnown RBP9.1□□□□□ -0.95
GPNMB-204ENST00000459927 WT1-ASQ06250 92 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 ODF3L2Q3SX64 289 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 LGALS9CQ6DKI2 356 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 TMEM217Q8N7C4 229 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 OR13F1Q8NGS4 319 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 SCARB1Q8WTV0 552 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 PHLDA1Q8WV24 401 aaPredicted RBP9.1□□□□□ -0.95
GPNMB-204ENST00000459927 TMEM190Q8WZ59 177 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 CHRDL1Q9BU40 450 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 QTRT1Q9BXR0 403 aaKnown RBP9.1□□□□□ -0.95
GPNMB-204ENST00000459927 SLC5A7Q9GZV3 580 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 PLEKHA2Q9HB19 425 aa9.1□□□□□ -0.95
GPNMB-204ENST00000459927 DAZ1Q9NQZ3 744 aaKnown RBP9.1□□□□□ -0.95
GPNMB-204ENST00000459927 HERC2O95714 4834 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 NDUFA4O00483 81 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 CYB5BO43169 146 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 S1PR2O95136 353 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 CTSDP07339 412 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-204ENST00000459927 GNRHRP30968 328 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 ADMP35318 185 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 MFAP2P55001 183 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 CMC4P56277 68 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-204ENST00000459927 ARPC4P59998 168 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 ZNF818PQ6ZRF7 136 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 HSD17B13Q7Z5P4 300 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-204ENST00000459927 GDPD1Q8N9F7 314 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 DMBX1Q8NFW5 382 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 OR5B3Q8NH48 314 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 CD300LFQ8TDQ1 290 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 BSCL2Q96G97 398 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-204ENST00000459927 CNBD2Q96M20 576 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 ATP6V0BQ99437 205 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 CSTL1Q9H114 145 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 NDUFA4L2Q9NRX3 87 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 SMPXQ9UHP9 88 aa9.09□□□□□ -0.95
GPNMB-204ENST00000459927 RRP15Q9Y3B9 282 aaKnown RBP9.09□□□□□ -0.95
GPNMB-204ENST00000459927 IGHV3-21A0A0B4J1V1 117 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 OR4C46A6NHA9 309 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 F8W735 103 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-204ENST00000459927 DEDDO75618 318 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 CTSGP08311 255 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 CATR1Q13166 79 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 UBE2UQ5VVX9 321 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 THOC7Q6I9Y2 204 aaKnown RBP9.08□□□□□ -0.96
GPNMB-204ENST00000459927 SFXN4Q6P4A7 337 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 DHRS11Q6UWP2 260 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 APRG1Q8IVJ8 170 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 CADM3Q8N126 398 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 OR1L8Q8NGR8 309 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 OR5H6Q8NGV6 325 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 C20orf24Q9BUV8 137 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 RHBDL2Q9NX52 303 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 C21orf62Q9NYP8 219 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 BLOC1S6Q9UL45 172 aa9.08□□□□□ -0.96
GPNMB-204ENST00000459927 IGHV3OR16-8A0A075B7F1 116 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
GPNMB-204ENST00000459927 MRPS14O60783 128 aaKnown RBP9.07□□□□□ -0.96
GPNMB-204ENST00000459927 FCER2P06734 321 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 FCGR2BP31994 310 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-204ENST00000459927 SDC2P34741 201 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 FXYD4P59646 89 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 SPARTQ8N0X7 666 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 OR5AP2Q8NGF4 316 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 OR51H1Q8NH63 302 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 LGALS14Q8TCE9 139 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 ZNF414Q96IQ9 312 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 RNF2Q99496 336 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 RARRES2Q99969 163 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 AUNIPQ9H7T9 357 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 SSR3Q9UNL2 185 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 ETV7Q9Y603 341 aa9.07□□□□□ -0.96
GPNMB-204ENST00000459927 F11RQ9Y624 299 aaKnown RBP9.07□□□□□ -0.96
GPNMB-204ENST00000459927 VPS13DQ5THJ4 4388 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 MPTX1A8MV57 137 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 K7EIM0 57 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 CHEK1O14757 476 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 PGLYRP1O75594 196 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-204ENST00000459927 CLEC2LP0C7M8 214 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 F2RP25116 425 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 LPAR6P43657 344 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 ZNF124Q15973 351 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 AADACL3Q5VUY0 350 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 GATAD1Q8WUU5 269 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 HINT2Q9BX68 163 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 C6orf62Q9GZU0 229 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-204ENST00000459927 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
GPNMB-204ENST00000459927 A0A0A6YYH2 397 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 A6NJ64 397 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 KRASP01116 189 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 IFNA4P05014 189 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 SCAND1P57086 179 aa9.05□□□□□ -0.96
GPNMB-204ENST00000459927 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
GPNMB-204ENST00000459927 MXD1Q05195 221 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms