RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SEC14L6B5MCN3 397 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 PROP1O75360 226 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 PPT1P50897 306 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 DIAPH2-AS1Q14236 149 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 SP6Q3SY56 376 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 RPL39P5Q59GN2 51 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 ACSM6Q6P461 480 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 HSD17B13Q7Z5P4 300 aaPredicted RBP8.39□□□□□ -1.07
USP39-210ENST00000459775 C8orf46Q8TAG6 207 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 RAB39BQ96DA2 213 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 AGMATQ9BSE5 352 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 SNHG12Q9BXW3 62 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 OR2D2Q9H210 308 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 LINC00574Q9H8X3 128 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 DNAJC4Q9NNZ3 241 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 IGHV3OR16-10A0A075B7F0 116 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 IGHV2-70DA0A0C4DH43 119 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 RAB7AP51149 207 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 DSCR9P59020 149 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 RELBQ01201 579 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 POU2AF1Q16633 256 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 STPG2Q8N412 459 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 ZNF439Q8NDP4 499 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 SPAG8Q99932 426 aaPredicted RBP8.39□□□□□ -1.07
USP39-210ENST00000459775 NKX6-2Q9C056 277 aaPredicted RBP8.39□□□□□ -1.07
USP39-210ENST00000459775 MS4A7Q9GZW8 240 aaPredicted RBP8.39□□□□□ -1.07
USP39-210ENST00000459775 HSPB11Q9Y547 144 aa8.39□□□□□ -1.07
USP39-210ENST00000459775 K7ERU9 68 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 CNIH1O95406 144 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 MT-CO2P00403 227 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 SLC25A16P16260 332 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 REG1BP48304 166 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 PIGPP57054 158 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 RPL32P62910 135 aaKnown RBP8.38□□□□□ -1.07
USP39-210ENST00000459775 PPP1R1AQ13522 171 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 LDLRAD2Q5SZI1 272 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 ABHD12Q8N2K0 398 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 DRAM1Q8N682 238 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 BVESQ8NE79 360 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 SLC25A21Q9BQT8 299 aaPredicted RBP8.38□□□□□ -1.07
USP39-210ENST00000459775 IFI27L2Q9H2X8 130 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 RAB18Q9NP72 206 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 JPT1Q9UK76 154 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 WNK2Q9Y3S1 2297 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 YPEL1O60688 119 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 FGF2P09038 288 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 SUPT4H1P63272 117 aaKnown RBP8.38□□□□□ -1.07
USP39-210ENST00000459775 PYY3Q5JQD4 70 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 CD276Q5ZPR3 534 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 HCP5Q6MZN7 132 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 VMO1Q7Z5L0 202 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 FAM219AQ8IW50 185 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 ODF3L1Q8IXM7 274 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 LYG1Q8N1E2 194 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 OR5R1Q8NH85 324 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 CASTOR1Q8WTX7 329 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 LHX4Q969G2 390 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 MSI2Q96DH6 328 aaKnown RBP8.38□□□□□ -1.07
USP39-210ENST00000459775 YPEL2Q96QA6 119 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 MDFIQ99750 246 aa8.38□□□□□ -1.07
USP39-210ENST00000459775 SOX21Q9Y651 276 aaPredicted RBP8.38□□□□□ -1.07
USP39-210ENST00000459775 FLNAP21333 2647 aaKnown RBP8.38□□□□□ -1.07
USP39-210ENST00000459775 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 ENSAO43768 121 aaKnown RBP8.37□□□□□ -1.07
USP39-210ENST00000459775 SSNA1O43805 119 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 FOXH1O75593 365 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 AVPP01185 164 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 S100GP29377 79 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 RPL30P62888 115 aaKnown RBP8.37□□□□□ -1.07
USP39-210ENST00000459775 LINC01551Q86U37 167 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 OR51H1Q8NH63 302 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 ABHD14AQ9BUJ0 271 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 TMEM133Q9H2Q1 129 aa8.37□□□□□ -1.07
USP39-210ENST00000459775 SAA2-SAA4A0A096LPE2 208 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 IGHV2-26A0A0B4J1V2 119 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 SOX15O60248 233 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 CRYBA1P05813 215 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 MSMBP08118 114 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 SAA2P0DJI9 122 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 DVL1P1P54792 670 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 RAG2P55895 527 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 FOXE3Q13461 319 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 ABCA11PQ4W5N1 156 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 TCTEX1D4Q5JR98 221 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 LAMTOR1Q6IAA8 161 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 GLDNQ6ZMI3 551 aaPredicted RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 SLC25A42Q86VD7 318 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 PRIMA1Q86XR5 153 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 ZDHHC22Q8N966 263 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 HYLS1Q96M11 299 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 TBX15Q96SF7 602 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 CSDC2Q9Y534 153 aaKnown RBP8.36□□□□□ -1.07
USP39-210ENST00000459775 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
USP39-210ENST00000459775 LINC00473A8K010 186 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms