RNA–Protein interactions for RNA: ENST00000459750.5

MCF2L2-204, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 3,090 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-204ENST00000459750 RBFOX3A6NFN3 312 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 LRRC30A6NM36 301 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 ZNF705GA8MUZ8 300 aaPredicted RBP7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 DVL1O14640 695 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 RRHO14718 337 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 HSPB1P04792 205 aaKnown RBP7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 IL6RP08887 468 aaPredicted RBP7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 GZMBP10144 247 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 MMP9P14780 707 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 GFI1BQ5VTD9 330 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 SPSB3Q6PJ21 355 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 ZNF525Q8N782 197 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 OR4A16Q8NH70 328 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 RPUSD4Q96CM3 377 aaKnown RBP7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 HIPK2Q9H2X6 1198 aa7.44□□□□□ -1.22
MCF2L2-204ENST00000459750 TRBV6-6A0A0A6YYG2 114 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 MGST3O14880 152 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 CCL25O15444 150 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 GZMHP20718 246 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 BRS3P32247 399 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 MC5RP33032 325 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 LGALS4P56470 323 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 C19orf35Q6ZS72 473 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 S1PR3Q99500 378 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 CCDC168Q8NDH2 2452 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 LMO1P25800 156 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 DUTP33316 252 aaKnown RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 TIMP3P35625 211 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 RPL29P47914 159 aaKnown RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 ZNF787Q6DD87 383 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 RAB40CQ96S21 281 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 SFXN3Q9BWM7 321 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 TRGV10A0A0A0MS01 117 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 CCL21O00585 134 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 CYB5BO43169 146 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 ENSAO43768 121 aaKnown RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 ACTL6BO94805 426 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 TAS2R30P59541 319 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 RPL31P62899 125 aaKnown RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 ASPHD1Q5U4P2 390 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 ACSM6Q6P461 480 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 LHX4Q969G2 390 aa7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 RAI1Q7Z5J4 1906 aaPredicted RBP7.43□□□□□ -1.22
MCF2L2-204ENST00000459750 CD24P25063 80 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 LOXL3P58215 753 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 C17orf58Q2M2W7 97 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 RPP25LQ8N5L8 163 aaKnown RBP7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 OR10W1Q8NGF6 305 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 SNX22Q96L94 193 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 SLC35B3Q9H1N7 401 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 IFI27L2Q9H2X8 130 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 FAM157AC9JC47 383 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 FCN3O75636 299 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 REG1AP05451 166 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 TNFSF4P23510 183 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 COMPP49747 757 aaPredicted RBP7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 HBG1P69891 147 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 HBG2P69892 147 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 MSMO1Q15800 293 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 FFAR4Q5NUL3 377 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 TCF23Q7RTU1 214 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 OR10P1Q8NGE3 313 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 GAFA1Q96PS6 74 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 ARV1Q9H2C2 271 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 SLC39A9Q9NUM3 307 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 TMEM140Q9NV12 185 aa7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 SLC25A10Q9UBX3 287 aaPredicted RBP7.42□□□□□ -1.22
MCF2L2-204ENST00000459750 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 PGPEP1LA6NFU8 196 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 RNF212BA8MTL3 300 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 H3BQ15 152 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 DFFBO76075 338 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 TAF15Q92804 592 aaKnown RBP eCLIP7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 SCRT1Q9BWW7 348 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 DOPEY2Q9Y3R5 2298 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 MAP1LC3B2A6NCE7 125 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 E7EQL1 145 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 M0QZ24 198 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 COX7A1P24310 79 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 RAB7AP51149 207 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 SRSF7Q16629 238 aaKnown RBP eCLIP7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 COL5A1-AS1Q5SY13 56 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 ZNF705AQ6ZN79 300 aaPredicted RBP7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 ZNF429Q86V71 674 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 OR51G1Q8NGK1 321 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 PPP1R35Q8TAP8 253 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 PINX1Q96BK5 328 aaKnown RBP7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 RAB39BQ96DA2 213 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 PBDC1Q9BVG4 233 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 MAP1LC3BQ9GZQ8 125 aa7.41□□□□□ -1.22
MCF2L2-204ENST00000459750 RYDENQ9NUL5 291 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms