RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SLC38A11Q08AI6 406 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 IL15RAQ13261 267 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 EXOSC2Q13868 293 aaKnown RBP4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 DIAPH2-AS1Q14236 149 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 CLINT1Q14677 625 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRSS8Q16651 343 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 IZUMO4Q1ZYL8 232 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 C5orf64Q2M2E5 130 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 AKR1C8PQ5T2L2 129 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 HIST2H2BCQ6DN03 193 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 TEX261Q6UWH6 196 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF562Q6V9R5 426 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 C9orf62Q8N4C0 152 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 MAPK1IP1LQ8NDC0 245 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 NPBQ8NG41 125 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF418Q8TF45 676 aaPredicted RBP4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 RNF141Q8WVD5 230 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 SSMEM1Q8WWF3 244 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 CACNG8Q8WXS5 425 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 TMEM147Q9BVK8 224 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZNF430Q9H8G1 570 aaPredicted RBP4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 NPVFQ9HCQ7 196 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 UQCC1Q9NVA1 299 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 GAR1Q9NY12 217 aaKnown RBP4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 PFDN2Q9UHV9 154 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 RNF24Q9Y225 148 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 TET2Q6N021 2002 aaPredicted RBP4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 ZFHX4Q86UP3 3567 aa4.7□□□□□ -1.66
RNU1-88P-201ENST00000459274 TRAV14DV4A0A0A6YYC5 116 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 A0A0U1RQK1 487 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 A0A1W2PPV4 95 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 MSGN1A6NI15 193 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 UMAD1C9J7I0 102 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 H3BUX3 64 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 HMGB3O15347 200 aaKnown RBP4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 FGF16O43320 207 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 CD5LO43866 347 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 CXCL2P19875 107 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 CD24P25063 80 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 BRWD1-AS2P59051 145 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC35B1P78383 322 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 DLK1P80370 383 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 EBI3Q14213 229 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 HABP2Q14520 560 aaPredicted RBP4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 C2orf83Q53S99 150 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 Q5BKY6 102 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 SPINK9Q5DT21 86 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 TEPPQ6URK8 271 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 Q6ZRG5 221 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 Q6ZRM9 215 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 UBAC2Q8NBM4 344 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 WFDC11Q8NEX6 87 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 STOML3Q8TAV4 291 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 RNASEH2CQ8TDP1 164 aaKnown RBP4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 SCARB1Q8WTV0 552 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 SRSF12Q8WXF0 261 aaKnown RBP4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 ST8SIA2Q92186 375 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 ARPC1AQ92747 370 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 MISP3Q96FF7 219 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 C5orf30Q96GV9 206 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 RBM14Q96PK6 669 aaKnown RBP4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 NPFFR1Q9GZQ6 430 aa4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 ANKRD17O75179 2603 aaKnown RBP4.69□□□□□ -1.66
RNU1-88P-201ENST00000459274 MYO18BQ8IUG5 2567 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 TRAV30A0A087WSZ9 112 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 A0A0G2JRQ6 117 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 SRRM4A7MD48 611 aaKnown RBP4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 FNDC10F2Z333 226 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 H0YIZ8 118 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 TRIM77I1YAP6 450 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 FBXO24O75426 580 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 NDUFA3O95167 84 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 CA2P00918 260 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 IGLV2-23P01705 113 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 SEC11BP0C7V7 166 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 IGHV4-38-2P0DP08 117 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 CD99P14209 185 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 FOSL1P15407 271 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 SRD5A1P18405 259 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 FGF7P21781 194 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 GPX4P36969 197 aaPredicted RBP4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 NPBWR1P48145 328 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 CAMLGP49069 296 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 SERF2P84101 59 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 LY6EQ16553 131 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 ACOT6Q3I5F7 207 aaPredicted RBP4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 FAM209BQ5JX69 171 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 UTF1Q5T230 341 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 RUSC1-AS1Q66K80 236 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 HCP5Q6MZN7 132 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 UNQ5815/PRO19632Q6UWF5 114 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 ALKAL2Q6UX46 152 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 C1orf229Q6ZS94 237 aaPredicted RBP4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 SLC35E3Q7Z769 313 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 HSD17B11Q8NBQ5 300 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 OR2G3Q8NGZ4 309 aa4.68□□□□□ -1.66
RNU1-88P-201ENST00000459274 CFHR4Q92496 578 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms