RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 S100A7P31151 101 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 VDAC2P45880 294 aaPredicted RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 LGALS4P56470 323 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 ZXDAP98168 799 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 TGFBR3Q03167 851 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 AESQ08117 197 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 TMEM183BQ1AE95 376 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 SPINK9Q5DT21 86 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 TOMM20LQ6UXN7 152 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 Q6ZR03 302 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 HES7Q9BYE0 225 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 PATZ1Q9HBE1 687 aaKnown RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 LSM4Q9Y4Z0 139 aaKnown RBP7.04□□□□□ -1.28
VPS50-208ENST00000458707 R4GN57 208 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 ARL2-SNX15V9GYD0 113 aa7.04□□□□□ -1.28
VPS50-208ENST00000458707 TRGV10A0A0A0MS01 117 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 K7EN84 100 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 SERF1AO75920 110 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 NDUFB8O95169 186 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 CFIP05156 583 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 SP1P08047 785 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 ADH4P08319 380 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 AREGP15514 252 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 BMP5P22003 454 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 CBLN1P23435 193 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 DUTP33316 252 aaKnown RBP7.03□□□□□ -1.28
VPS50-208ENST00000458707 PLGLB1Q02325 96 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 ZNF90Q03938 601 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 FOXF2Q12947 444 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 PSG7Q13046 419 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 ALKBH6Q3KRA9 238 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 ABHD17BQ5VST6 288 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 TRAT1Q6PIZ9 186 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 ZNF705AQ6ZN79 300 aaPredicted RBP7.03□□□□□ -1.28
VPS50-208ENST00000458707 ACP7Q6ZNF0 438 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 STXBP6Q8NFX7 210 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 SLC25A40Q8TBP6 338 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 SPRY4Q9C004 299 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 MS4A5Q9H3V2 200 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 CST9LQ9H4G1 147 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 SIT1Q9Y3P8 196 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 YTHDF2Q9Y5A9 579 aaKnown RBP7.03□□□□□ -1.28
VPS50-208ENST00000458707 HEATR1Q9H583 2144 aaKnown RBP7.03□□□□□ -1.28
VPS50-208ENST00000458707 CHD6Q8TD26 2715 aa7.03□□□□□ -1.28
VPS50-208ENST00000458707 SAA2-SAA4A0A096LPE2 208 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 C15orf65H3BRN8 121 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 M0R296 226 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 PROP1O75360 226 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 GRPP07492 148 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 CELA3BP08861 270 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 GCHFRP30047 84 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 LGALS7P47929 136 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 RPL31P62899 125 aaKnown RBP7.02□□□□□ -1.28
VPS50-208ENST00000458707 RHOGP84095 191 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 HLA-DRB5Q30154 266 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 TDRG1Q3Y452 100 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 MIC13Q5XKP0 118 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 ASCL5Q7RTU5 278 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 OR5AU1Q8NGC0 362 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 HSPB9Q9BQS6 159 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 GNB1LQ9BYB4 327 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 TUBG2Q9NRH3 451 aa7.02□□□□□ -1.28
VPS50-208ENST00000458707 TPRP12270 2363 aaKnown RBP7.02□□□□□ -1.29
VPS50-208ENST00000458707 TRGV8A0A0C4DH27 118 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 WNT9BO14905 357 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 CER1O95813 267 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 OR10J4P0C629 311 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 CD33P20138 364 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 SSTR5P35346 364 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 CDKN1AP38936 164 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 GABRA2P47869 451 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 LINC00205P59089 165 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 RHOBP62745 196 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 RELBQ01201 579 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 EFNB3Q15768 340 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 C3AR1Q16581 482 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 RPEL1Q2QD12 228 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 OR10W1Q8NGF6 305 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 OR13A1Q8NGR1 328 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 Q8TCH9 128 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 DPF1Q92782 380 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
VPS50-208ENST00000458707 VAMP8Q9BV40 100 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 SFXN3Q9BWM7 321 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 NPVFQ9HCQ7 196 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 ABI3Q9P2A4 366 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 RALYQ9UKM9 306 aaKnown RBP7.02□□□□□ -1.29
VPS50-208ENST00000458707 V9GYV3 84 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 FRYLO94915 3013 aa7.02□□□□□ -1.29
VPS50-208ENST00000458707 PCNX2A6NKB5 2137 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 FAM186AA6NE01 2351 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.01□□□□□ -1.29
VPS50-208ENST00000458707 SLC17A3O00476 420 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 AQP7O14520 342 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 MT-CO2P00403 227 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 MT-ND6P03923 174 aa7.01□□□□□ -1.29
VPS50-208ENST00000458707 GPX1P07203 203 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms