RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PTBP1P26599 531 aaKnown RBP eCLIP13.55□□□□□ -0.24
MSH6-207ENST00000456246 ZNF585BQ52M93 769 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 ARRDC1Q8N5I2 433 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 OR1L6Q8NGR2 347 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 VN1R17PQ8TDU5 208 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 ZNF486Q96H40 463 aaPredicted RBP13.55□□□□□ -0.24
MSH6-207ENST00000456246 ATP6V0BQ99437 205 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
MSH6-207ENST00000456246 EXTL2Q9UBQ6 330 aa13.55□□□□□ -0.24
MSH6-207ENST00000456246 TEX50A0A1B0GTY4 177 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 OR13C7P0DN81 318 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 RPA2P15927 270 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 G6PCP35575 357 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 RNASE10Q5GAN6 216 aaKnown RBP13.54□□□□□ -0.24
MSH6-207ENST00000456246 TBC1D26Q86UD7 250 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 ZNF502Q8TBZ5 544 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 SLC2A8Q9NY64 477 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
MSH6-207ENST00000456246 MFSD2BA6NFX1 497 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 HLA-AP01891 365 aaKnown RBP13.53□□□□□ -0.24
MSH6-207ENST00000456246 CLEC3BP05452 202 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 SERPINE2P07093 398 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 FOLR2P14207 255 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 ALDH3B2P48448 385 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 MRPS10P82664 201 aaKnown RBP13.53□□□□□ -0.24
MSH6-207ENST00000456246 CD300EQ496F6 205 aaPredicted RBP13.53□□□□□ -0.24
MSH6-207ENST00000456246 ADAMTSL5Q6ZMM2 481 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 TM2D3Q9BRN9 247 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 PALMDQ9NP74 551 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 ZC4H2Q9NQZ6 224 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 MTFP1Q9UDX5 166 aa13.53□□□□□ -0.24
MSH6-207ENST00000456246 F11RQ9Y624 299 aaKnown RBP13.53□□□□□ -0.24
MSH6-207ENST00000456246 C15orf61A6NNL5 157 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 C3orf84H3BNL1 204 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 RND3P61587 244 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 WT1-ASQ06250 92 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 DEFB114Q30KQ6 69 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 OR52I2Q8NH67 350 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 MARC2Q969Z3 335 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 BCL7BQ9BQE9 202 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 TMEM14BQ9NUH8 114 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 KLK11Q9UBX7 282 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 S4R3C0 116 aa13.52□□□□□ -0.25
MSH6-207ENST00000456246 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 IZUMO1RA6ND01 250 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 M0QYG6 137 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 CBLN1P23435 193 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 GPR183P32249 361 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 SSBP1Q04837 148 aaKnown RBP13.51□□□□□ -0.25
MSH6-207ENST00000456246 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 H2BFWTQ7Z2G1 175 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 LHFPL1Q86WI0 220 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 RAB2BQ8WUD1 216 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 HINT2Q9BX68 163 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 RABL2AQ9UBK7 228 aaPredicted RBP13.51□□□□□ -0.25
MSH6-207ENST00000456246 RABL2BQ9UNT1 228 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 NSG2Q9Y328 171 aa13.51□□□□□ -0.25
MSH6-207ENST00000456246 TMEM213A2RRL7 107 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 ATG12O94817 140 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 CD3DP04234 171 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 PGAM2P15259 253 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 ELLP55199 621 aaPredicted RBP13.5□□□□□ -0.25
MSH6-207ENST00000456246 TAS2R19P59542 299 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 CD81P60033 236 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 SPSB3Q6PJ21 355 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 TMEM229BQ8NBD8 167 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 OR4A16Q8NH70 328 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
MSH6-207ENST00000456246 SEC22AQ96IW7 307 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 SPATA25Q9BR10 227 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 UFC1Q9Y3C8 167 aa13.5□□□□□ -0.25
MSH6-207ENST00000456246 GABARAPH6UMI1 98 aa13.49□□□□□ -0.25
MSH6-207ENST00000456246 RGS5O15539 181 aa13.49□□□□□ -0.25
MSH6-207ENST00000456246 TGOLN2O43493 480 aa13.49□□□□□ -0.25
MSH6-207ENST00000456246 RNASE12Q5GAN4 147 aaKnown RBP13.49□□□□□ -0.25
MSH6-207ENST00000456246 ZNF57Q68EA5 555 aaPredicted RBP13.49□□□□□ -0.25
MSH6-207ENST00000456246 OR1P1Q8NH06 330 aa13.49□□□□□ -0.25
MSH6-207ENST00000456246 ABHD1Q96SE0 405 aa13.49□□□□□ -0.25
MSH6-207ENST00000456246 GAR1Q9NY12 217 aaKnown RBP13.49□□□□□ -0.25
MSH6-207ENST00000456246 ZNF785A8K8V0 405 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 B3GALNT1O75752 331 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 CD74P04233 296 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 GUCA2BQ16661 112 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 CCDC71LQ8N9Z2 235 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 MUC7Q8TAX7 377 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 ZFAND1Q8TCF1 268 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 ZNF436Q9C0F3 470 aaPredicted RBP13.48□□□□□ -0.25
MSH6-207ENST00000456246 C21orf62Q9NYP8 219 aa13.48□□□□□ -0.25
MSH6-207ENST00000456246 CCDC59Q9P031 241 aaKnown RBP13.48□□□□□ -0.25
MSH6-207ENST00000456246 MRPL27Q9P0M9 148 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms